RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 CGB2Q6NT52 195 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 ZCCHC12Q6PEW1 402 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 CREBRFQ8IUR6 639 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 PDCL2Q8N4E4 241 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 CFAP57Q96MR6 1250 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 ANKRD27Q96NW4 1050 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 TNFRSF13CQ96RJ3 184 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 CNOT10Q9H9A5 744 aaKnown RBP3.05□□□□□ -1.92
LINC01040-201ENST00000425048 C3orf14Q9HBI5 128 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 TBC1D22BQ9NU19 505 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 PKD2L2Q9NZM6 624 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 ARMCX1Q9P291 453 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 COLEC10Q9Y6Z7 277 aa3.05□□□□□ -1.92
LINC01040-201ENST00000425048 SYNJ1O43426 1573 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 NPC1L1Q9UHC9 1359 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 GLOD5A6NK44 160 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 ODC1P11926 461 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 EEF1B2P24534 225 aaKnown RBP3.04□□□□□ -1.92
LINC01040-201ENST00000425048 DUTP33316 252 aaKnown RBP3.04□□□□□ -1.92
LINC01040-201ENST00000425048 SSR1P43307 286 aaKnown RBP3.04□□□□□ -1.92
LINC01040-201ENST00000425048 BRCC3P46736 316 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 TDO2P48775 406 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 ERVPABLB-1P60509 514 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 RALGDSQ12967 914 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 NAA16Q6N069 864 aaPredicted RBP3.04□□□□□ -1.92
LINC01040-201ENST00000425048 ARMCX5Q6P1M9 558 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 CASC1Q6TDU7 716 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 Q6ZVQ6 151 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 NAXDQ8IW45 347 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 SYT2Q8N9I0 419 aaPredicted RBP3.04□□□□□ -1.92
LINC01040-201ENST00000425048 GTSF1Q8WW33 167 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 FAM210AQ96ND0 272 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 MUS81Q96NY9 551 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 EXOC1Q9NV70 894 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 HAUS2Q9NVX0 235 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 ZNF446Q9NWS9 450 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 MRPL15Q9P015 296 aaKnown RBP3.04□□□□□ -1.92
LINC01040-201ENST00000425048 RPS6KB2Q9UBS0 482 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 CTNNA3Q9UI47 895 aa3.04□□□□□ -1.92
LINC01040-201ENST00000425048 KANK1Q14678 1352 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 RAB3GAP2Q9H2M9 1393 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 TRBV5-4A0A0C4DH59 114 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 A8MV72 311 aaPredicted RBP3.03□□□□□ -1.92
LINC01040-201ENST00000425048 AP5Z1O43299 807 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 REC8O95072 547 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 MYL6BP14649 208 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 CASQ1P31415 396 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 HOXD13P35453 343 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 HSD17B3P37058 310 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 ZNF133P52736 654 aaPredicted RBP3.03□□□□□ -1.92
LINC01040-201ENST00000425048 CLDN17P56750 224 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 SYCP1Q15431 976 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 ECSCRQ19T08 205 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 CELF3Q5SZQ8 465 aaKnown RBP3.03□□□□□ -1.92
LINC01040-201ENST00000425048 FAM180BQ6P0A1 224 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 DNAAF5Q86Y56 855 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 FAM9BQ8IZU0 186 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 PRSS35Q8N3Z0 413 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 CARNMT1Q8N4J0 409 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 CCDC63Q8NA47 563 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 TEKT4Q8WW24 435 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 OTUB1Q96FW1 271 aaPredicted RBP3.03□□□□□ -1.92
LINC01040-201ENST00000425048 MPP4Q96JB8 637 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 SIGLEC12Q96PQ1 595 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 GPR88Q9GZN0 384 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 CHMP5Q9NZZ3 219 aa3.03□□□□□ -1.92
LINC01040-201ENST00000425048 KIF21AQ7Z4S6 1674 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 TEX48A0A1B0GUV7 120 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 ZSCAN5CA6NGD5 496 aaPredicted RBP3.02□□□□□ -1.93
LINC01040-201ENST00000425048 RSPH10B2B2RC85 870 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 SLC33A1O00400 549 aaPredicted RBP3.02□□□□□ -1.93
LINC01040-201ENST00000425048 RSPH10BP0C881 870 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 CYP11B2P19099 503 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 PTGISQ16647 500 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 GSG1Q2KHT4 349 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 HSP90AB4PQ58FF6 505 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 C9orf129Q5T035 196 aaKnown RBP3.02□□□□□ -1.93
LINC01040-201ENST00000425048 TEX35Q5T0J7 233 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 TTC27Q6P3X3 843 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 DHRS11Q6UWP2 260 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 CAMKMTQ7Z624 323 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 TEX26Q8N6G2 289 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 MNS1Q8NEH6 495 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 LINC01006Q8NI28 216 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 TSPAN18Q96SJ8 248 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 HSD17B14Q9BPX1 270 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 CCDC106Q9BWC9 280 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 GHITMQ9H3K2 345 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 PLSCR3Q9NRY6 295 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 BAZ1AQ9NRL2 1556 aaPredicted RBP3.02□□□□□ -1.93
LINC01040-201ENST00000425048 NCOA1Q15788 1441 aa3.02□□□□□ -1.93
LINC01040-201ENST00000425048 E9PCH4 1651 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 LRPPRCP42704 1394 aaKnown RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 SPAG9O60271 1321 aaKnown RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 ANKRD18BA2A2Z9 1011 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 ERICH4A6NGS2 130 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 A8MU76 341 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 KRTAP4-16G5E9R7 235 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 MPHOSPH10O00566 681 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms