RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 HHIPQ96QV1 700 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 EPYCQ99645 322 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 CNPPD1Q9BV87 410 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 SLC46A2Q9BY10 475 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 BARHL1Q9BZE3 327 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 ZFYVE1Q9HBF4 777 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 EXOSC4Q9NPD3 245 aaKnown RBP13.77□□□□□ -0.21
MSH5-206ENST00000423982 FAM227AF5H4B4 570 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 SMAD6O43541 496 aaKnown RBP13.77□□□□□ -0.21
MSH5-206ENST00000423982 CLDN11O75508 207 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 GABRB1P18505 474 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 SLC11A2P49281 568 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 SSX1Q16384 188 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 EXOC3L2Q2M3D2 409 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 ZFP69Q49AA0 526 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 Q5BKY6 102 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 CERS6Q6ZMG9 384 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 GPR155Q7Z3F1 870 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 CMTM7Q96FZ5 175 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 SLC30A2Q9BRI3 323 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 TMEM246Q9BRR3 403 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 TMEM121BQ9BXQ6 578 aaPredicted RBP13.77□□□□□ -0.21
MSH5-206ENST00000423982 OR2B2Q9GZK3 357 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 PRM3Q9NNZ6 103 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 PAQR5Q9NXK6 330 aaPredicted RBP13.77□□□□□ -0.21
MSH5-206ENST00000423982 TAS2R9Q9NYW1 312 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 PCDHGB3Q9Y5G1 929 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 WWP2O00308 870 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 CCR7P32248 378 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 SOX3P41225 446 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 SPIBQ01892 262 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 MTAPQ13126 283 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 GPR50Q13585 617 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 COX20Q5RI15 118 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 UBE2R2Q712K3 238 aaPredicted RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 ATCAYQ86WG3 371 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 GPR65Q8IYL9 337 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 LGI4Q8N135 537 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 ASCC1Q8N9N2 400 aaKnown RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 WFDC5Q8TCV5 224 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 MYO19Q96H55 970 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 ZSWIM3Q96MP5 696 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 FYTTD1Q96QD9 318 aaKnown RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 MCCC1Q96RQ3 725 aaPredicted RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 MGLLQ99685 303 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 TIGARQ9NQ88 270 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 PLCXD1Q9NUJ7 323 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 RHCGQ9UBD6 479 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 A3GALT2U3KPV4 340 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 MN1Q10571 1320 aaPredicted RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 CKMT1AP12532 417 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 CD22P20273 847 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 ITGALP20701 1170 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 RPS3P23396 243 aaKnown RBP eCLIP13.76□□□□□ -0.21
MSH5-206ENST00000423982 HNF1BP35680 557 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 RPS19P39019 145 aaKnown RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 CLPPQ16740 277 aaPredicted RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 SLX4IPQ5VYV7 408 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 ZNF544Q6NX49 715 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 TPGS1Q6ZTW0 290 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 LAX1Q8IWV1 398 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 GALNT12Q8IXK2 581 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 OVCA2Q8WZ82 227 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 TRMT61AQ96FX7 289 aaKnown RBP13.76□□□□□ -0.21
MSH5-206ENST00000423982 MKLN1Q9UL63 735 aa13.76□□□□□ -0.21
MSH5-206ENST00000423982 ANAPC1Q9H1A4 1944 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 GLYATL1P3A0A0U1RQE8 302 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 FAM172BPA6NC97 362 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 NOTOA8MTQ0 251 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 PCDH17O14917 1159 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 AOAHP28039 575 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 DAB2P98082 770 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 GANABQ14697 944 aaKnown RBP13.75□□□□□ -0.21
MSH5-206ENST00000423982 ZNF517Q6ZMY9 492 aaPredicted RBP13.75□□□□□ -0.21
MSH5-206ENST00000423982 RNF165Q6ZSG1 346 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 PGBD3Q8N328 593 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 PRRG3Q9BZD7 231 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 IMPAD1Q9NX62 359 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 SMIM30A4D0T7 59 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 FHP07954 510 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 CHRM5P08912 532 aaPredicted RBP13.75□□□□□ -0.21
MSH5-206ENST00000423982 SOX6P35712 828 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 CSNK2BP67870 215 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 CHIT1Q13231 466 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 LRRC73Q5JTD7 316 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 FRG2Q64ET8 278 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 WDR36Q8NI36 951 aaKnown RBP13.75□□□□□ -0.21
MSH5-206ENST00000423982 ADAMTS19Q8TE59 1207 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 CHAC2Q8WUX2 184 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 FOXJ1Q92949 421 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 DEPDC7Q96QD5 511 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 FRG2BQ96QU4 278 aa13.75□□□□□ -0.21
MSH5-206ENST00000423982 P2RY13Q9BPV8 354 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms