RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 OR7G3Q8NG95 312 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 OR11H4Q8NGC9 324 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 KCNJ9Q92806 393 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 NELL1Q92832 810 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 USP7Q93009 1102 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 MND1Q9BWT6 205 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 POLR2J2Q9GZM3 115 aaKnown RBP7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 SLC28A3Q9HAS3 691 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 SCPEP1Q9HB40 452 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 FZD3Q9NPG1 666 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 MANBAO00462 879 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 FFAR2O15552 330 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 CELF2O95319 508 aaKnown RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 IGHA2P01877 340 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 SRCP12931 536 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 SDC2P34741 201 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 CDKN1CP49918 316 aaPredicted RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 EPHA5P54756 1037 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 RPA4Q13156 261 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 TNFAIP1Q13829 316 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF273Q14593 569 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 P2RY14Q15391 338 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 LIPKQ5VXJ0 399 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 MEDAGQ5VYS4 303 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF730Q6ZMV8 503 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 FAM9CQ8IZT9 166 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 SYNPOQ8N3V7 929 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 C3orf58Q8NDZ4 430 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.7□□□□□ -1.181e-6■■■■■ 28.4
HMGXB4-202ENST00000418170 PCNPQ8WW12 178 aaKnown RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 UCN3Q969E3 161 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PSMG2Q969U7 264 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ZIC5Q96T25 663 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 FAM129BQ96TA1 746 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 SEMA3CQ99985 751 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 DOHHQ9BU89 302 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 DPCDQ9BVM2 203 aaPredicted RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 CLEC4MQ9H2X3 399 aaPredicted RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 R3HDMLQ9H3Y0 253 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 NSUN3Q9H649 340 aaKnown RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 SYNDIG1Q9H7V2 258 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF175Q9Y473 711 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 HS3ST4Q9Y661 456 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PTCH2Q9Y6C5 1203 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 AP1M2Q9Y6Q5 423 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 A0A0A6YYJ9 748 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ZAR1LA6NP61 321 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PRPS2P11908 318 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 KELP23276 732 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PTBP1P26599 531 aaKnown RBP eCLIP7.7□□□□□ -1.182e-11■■□□□ 12
HMGXB4-202ENST00000418170 AGFG1P52594 562 aaKnown RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 RAB14P61106 215 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 FAM189BP81408 668 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF33BQ06732 778 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ZMYND11Q15326 602 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 DUOXA1Q1HG43 343 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ALFQ53S48 1182 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 C22orf42Q6IC83 251 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 NOTUMQ6P988 496 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PDZD3Q86UT5 571 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 LURAP1LQ8IV03 231 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 LAS2Q8IYD9 372 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 RIT1Q92963 219 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 WBP1Q96G27 269 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 SMARCD1Q96GM5 515 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 TSSK3Q96PN8 268 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 FAM193BQ96PV7 902 aaPredicted RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 RBP7Q96R05 134 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PANX1Q96RD7 426 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 MAPKAP1Q9BPZ7 522 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 MED28Q9H204 178 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 NCKAP1Q9Y2A7 1128 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 STON1Q9Y6Q2 735 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 REV3LO60673 3130 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ISM1B1AKI9 464 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 FPGTO14772 594 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 TAPBPO15533 448 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 MPC2O95563 127 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 HMBSP08397 361 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 TACR1P25103 407 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 HLA-FP30511 346 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 TPMTP51580 245 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PURAQ00577 322 aaKnown RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 EXOC3L2Q2M3D2 409 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 LEXMQ3ZCV2 418 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 XKR4Q5GH76 650 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 CFAP77Q6ZQR2 320 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 NANOGP1Q8N7R0 232 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PROKR2Q8NFJ6 384 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 OR52J3Q8NH60 311 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 NPLOC4Q8TAT6 608 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 PTP4A1Q93096 173 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 KATNB1Q9BVA0 655 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 TRIM62Q9BVG3 475 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ACPTQ9BZG2 426 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 SHARPINQ9H0F6 387 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 CSNK1G1Q9HCP0 422 aa7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 LYARQ9NX58 379 aaKnown RBP7.7□□□□□ -1.18
HMGXB4-202ENST00000418170 ELOVL2Q9NXB9 296 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms