RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NPIPA2E9PIF3 369 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 NPIPA3F8WFD2 350 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 DYNC1I1O14576 645 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 DNALI1O14645 258 aaPredicted RBP8.91□□□□□ -0.98
RFFL-203ENST00000413582 ERLIN1O75477 346 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
RFFL-203ENST00000413582 APRTP07741 180 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 JAK1P23458 1154 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 HRH2P25021 359 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 IVDP26440 423 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 ACVR2AP27037 513 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 NMBRP28336 390 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 SKIV2L2P42285 1042 aaKnown RBP8.91□□□□□ -0.98
RFFL-203ENST00000413582 MAGEA6P43360 314 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 TBPL1P62380 186 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 CDK16Q00536 496 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 SLC7A5Q01650 507 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 RTL6Q6ICC9 239 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 ARSKQ6UWY0 536 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 PAMR1Q6UXH9 720 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 Q71RC1 249 aaPredicted RBP8.91□□□□□ -0.98
RFFL-203ENST00000413582 ASPGQ86U10 573 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 SLC26A11Q86WA9 606 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 CDC20BQ86Y33 519 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 LIX1LQ8IVB5 337 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 AFAP1L2Q8N4X5 818 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 APCDD1LQ8NCL9 501 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 NFAM1Q8NET5 270 aaPredicted RBP8.91□□□□□ -0.98
RFFL-203ENST00000413582 WFDC11Q8NEX6 87 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 TBC1D20Q96BZ9 403 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 SLC30A3Q99726 388 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 TTYH2Q9BSA4 534 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 PHACTR1Q9C0D0 580 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 SLC6A16Q9GZN6 736 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 ZDHHC11Q9H8X9 412 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 EIF2B3Q9NR50 452 aaKnown RBP8.91□□□□□ -0.98
RFFL-203ENST00000413582 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 DEPPQ9NTK1 212 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 ARGLU1Q9NWB6 273 aaPredicted RBP8.91□□□□□ -0.98
RFFL-203ENST00000413582 Q9UFV3 132 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 LIPGQ9Y5X9 500 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 ARID1AO14497 2285 aa8.91□□□□□ -0.98
RFFL-203ENST00000413582 A0A0G2JMM0 328 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 A0A1W2PPB8 328 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 A0A1W2PRS3 328 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 TCRBV16S1A1N1A0A5B0 115 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 PINLYPA6NC86 204 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 FIGNL2A6NMB9 653 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 FAM166BA8MTA8 275 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 KIR3DP1A8MWS1 328 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 GOLGA8KD6RF30 607 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 GOLGA8TH3BQL2 631 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 GALR3O60755 368 aaPredicted RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 DNAJB6O75190 326 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 SEC31AO94979 1220 aaKnown RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 SLC35G6P0C7Q6 338 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 GLI4P10075 376 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 CHRM3P20309 590 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 ADH7P40394 386 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 ZFP36L2P47974 494 aaKnown RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 VPS41P49754 854 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 CLCN7P51798 805 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 DGKQP52824 942 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 SESN2P58004 480 aaPredicted RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 OLR1P78380 273 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 BASP1P80723 227 aaKnown RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 SNTB1Q13884 538 aaKnown RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 MORF4L2Q15014 288 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 HERC3Q15034 1050 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 TRIP13Q15645 432 aaPredicted RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 SLC25A35Q3KQZ1 300 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 GXYLT1Q4G148 440 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 MRNIPQ6NTE8 343 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 B3GNT6Q6ZMB0 384 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 QSOX2Q6ZRP7 698 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 TAOK1Q7L7X3 1001 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 CAMKMTQ7Z624 323 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 PPIL6Q8IXY8 311 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 CYP4X1Q8N118 509 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 ZNF740Q8NDX6 193 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 OR5M9Q8NGP3 310 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 OR10Q1Q8NGQ4 319 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 CREB3L4Q8TEY5 395 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 SLC13A3Q8WWT9 602 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 ASB11Q8WXH4 323 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 MFSD3Q96ES6 412 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 SMC6Q96SB8 1091 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 MDFIQ99750 246 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 DEFB126Q9BYW3 111 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 DEFB127Q9H1M4 99 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 CCDC177Q9NQR7 707 aaPredicted RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 GRHL1Q9NZI5 618 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 CRIM1Q9NZV1 1036 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 MTRF1LQ9UGC7 380 aaKnown RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.9□□□□□ -0.98
RFFL-203ENST00000413582 CRYL1Q9Y2S2 319 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 MED16Q9Y2X0 877 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 SNX24Q9Y343 169 aa8.9□□□□□ -0.98
RFFL-203ENST00000413582 V9GYY5 206 aaPredicted RBP8.9□□□□□ -0.98
RFFL-203ENST00000413582 HIVEP2P31629 2446 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms