RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF624Q9P2J8 865 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 DBF4Q9UBU7 674 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 PLCL2Q9UPR0 1127 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 A0A087WZ39 114 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF195O14628 629 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 OGTO15294 1046 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 ECE2O60344 883 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 CLPTM1O96005 669 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 EPOP01588 193 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 PGK2P07205 417 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 HMBSP08397 361 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 CD48P09326 243 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 ITGB6P18564 788 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 CCKARP32238 428 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 HSPA1LP34931 641 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 RPL36AP83881 106 aaKnown RBP4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 STX1AQ16623 288 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM76BQ5HYJ3 339 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 FFAR4Q5NUL3 377 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF776Q68DI1 518 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 SNRNP48Q6IEG0 339 aaKnown RBP4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 TCEAL6Q6IPX3 200 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF790Q6PG37 636 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 TMEM64Q6YI46 380 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 SMIM29Q86T20 159 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 CCDC185Q8N715 623 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 CNNM3Q8NE01 707 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 GANCQ8TET4 914 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 DYRK2Q92630 601 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLC35C1Q96A29 364 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 ESAMQ96AP7 390 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 LMLNQ96KR4 655 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 CXorf58Q96LI9 332 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 IL12RB2Q99665 862 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 DPEP3Q9H4B8 488 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 MARCH7Q9H992 704 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM212BQ9NTI7 297 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 MAN2C1Q9NTJ4 1040 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 COPS7AQ9UBW8 275 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM153AQ9UHL3 310 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 PILRAQ9UKJ1 303 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 CLCA3PQ9Y6N3 262 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 SCN5AQ14524 2016 aa4.22□□□□□ -1.73
HMGB3P31-201ENST00000413333 WDR81Q562E7 1941 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 RGSL1A5PLK6 1076 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 BMPR1BO00238 502 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 RASGRF2O14827 1237 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 B4GAT1O43505 415 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 KRT33AO76009 404 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 KRT36O76013 467 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 OR6B1O95007 311 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 CPNE6O95741 557 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 PTBP3O95758 552 aaKnown RBP4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 SFTPBP07988 381 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 KRT5P13647 590 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 ARF4P18085 180 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 AADACP22760 399 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 CALRP27797 417 aaKnown RBP4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 SOX3P41225 446 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 XGP55808 180 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 DLX5P56178 289 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 HERV-K104P63124 156 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 CNTN1Q12860 1018 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 GRB14Q14449 540 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 ZRSR1Q15695 479 aaKnown RBP4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 SLC25A47Q6Q0C1 308 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 LEKR1Q6ZMV7 388 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 RFPL4BQ6ZWI9 263 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 ADCK1Q86TW2 530 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 NLRP14Q86W24 1093 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 LACC1Q8IV20 430 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 SLC43A2Q8N370 569 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 TEX26Q8N6G2 289 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 CCDC197Q8NCU1 140 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 SMPDL3AQ92484 453 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 ZNF524Q96C55 264 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 SAMD8Q96LT4 415 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 C16orf45Q96MC5 204 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 PCDHB18PQ96TA0 734 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 RWDD1Q9H446 243 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 ZNF665Q9H7R5 613 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 NGBQ9NPG2 151 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 MIS18AQ9NYP9 233 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 PLEK2Q9NYT0 353 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 SELENOKQ9Y6D0 94 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 ATP8B3O60423 1300 aa4.21□□□□□ -1.74
HMGB3P31-201ENST00000413333 IGHV4-4A0A075B6R2 117 aa4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 MSGN1A6NI15 193 aa4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 PMS2P5A8MQ11 134 aa4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 SLC1A7O00341 560 aa4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 EEF2KO00418 725 aaKnown RBP4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 SSX5O60225 188 aa4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 NADKO95544 446 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 EML2O95834 649 aa4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 ERVK-10P10266 1014 aa4.2□□□□□ -1.74
HMGB3P31-201ENST00000413333 ANPEPP15144 967 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms