RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 REXO4Q9GZR2 422 aaKnown RBP7.29□□□□□ -1.24
CPSF4-202ENST00000412686 WDR54Q9H977 334 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 TNFRSF12AQ9NP84 129 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 PRDM7Q9NQW5 492 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 MKS1Q9NXB0 559 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 C3orf18Q9UK00 162 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 POLHQ9Y253 713 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 MAN2B2Q9Y2E5 1009 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 MAP4K5Q9Y4K4 846 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 KCNMB2Q9Y691 235 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 KMT2BQ9UMN6 2715 aaPredicted RBP7.29□□□□□ -1.24
CPSF4-202ENST00000412686 SEC16AO15027 2179 aa7.29□□□□□ -1.24
CPSF4-202ENST00000412686 TNRC6AQ8NDV7 1962 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 IGHV3-20A0A0C4DH32 117 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 IDSB3KWA1 339 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 K7EM74 188 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 AGPSO00116 658 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 PLPP1O14494 284 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 PRPF4O43172 522 aaKnown RBP eCLIP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 TYROBPO43914 113 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 UGDHO60701 494 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 B4GALT2O60909 372 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 PRKRAO75569 313 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 RECKO95980 971 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 OTCP00480 354 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 PRB1P04280 392 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 CELA2AP08217 269 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 CHN1P15882 459 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 NR1D1P20393 614 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 GSTM2P28161 218 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 ALDH3A1P30838 453 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 HTR6P50406 440 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 HNRNPFP52597 415 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 NAGLUP54802 743 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 EMP2P54851 167 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 POLE2P56282 527 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 STXBP1P61764 594 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 RHDQ02161 417 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 EEF1A2Q05639 463 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 RAPSNQ13702 412 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 MPP2Q14168 576 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 SSPNQ14714 243 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 GGTA1PQ4G0N0 100 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 CRTC2Q53ET0 693 aaPredicted RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 TNFAIP8L3Q5GJ75 292 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 LIPMQ5VYY2 423 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 METTL2BQ6P1Q9 378 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 TRIM40Q6P9F5 258 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 ABHD17CQ6PCB6 329 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 BORAQ6PGQ7 559 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 SCIMPQ6UWF3 145 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 KIRREL2Q6UWL6 708 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 LRIG3Q6UXM1 1119 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 ATG14Q6ZNE5 492 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 ZCCHC23Q6ZST2 131 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 LANCL3Q6ZV70 420 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 GPRIN3Q6ZVF9 776 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 RAB43Q86YS6 212 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 SLC22A9Q8IVM8 553 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 CDYL2Q8N8U2 506 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 MYRIPQ8NFW9 859 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 AGAP11Q8TF27 550 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 TSLPQ969D9 159 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 UBE2E3Q969T4 207 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 CATSPER2Q96P56 530 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 GATA5Q9BWX5 397 aaPredicted RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 ZNF717Q9BY31 904 aaPredicted RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 TGIF2Q9GZN2 237 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 VN1R1Q9GZP7 353 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 IQCGQ9H095 443 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 MLXIPLQ9NP71 852 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 MID1IP1Q9NPA3 183 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 MKKSQ9NPJ1 570 aaPredicted RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 LANCL2Q9NS86 450 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 OXSMQ9NWU1 459 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 P4HTMQ9NXG6 502 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 TRPS1Q9UHF7 1281 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 NXT1Q9UKK6 140 aaKnown RBP7.28□□□□□ -1.24
CPSF4-202ENST00000412686 MKL2Q9ULH7 1088 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 TIMM22Q9Y584 194 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 PCDHGA11Q9Y5H2 935 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 PKD1L2Q7Z442 2459 aa7.28□□□□□ -1.24
CPSF4-202ENST00000412686 MYOCOSA0A1B0GUC4 107 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 ARHGAP10A1A4S6 786 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 WDR91A4D1P6 747 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 URADA6NGE7 173 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 A6NL46 340 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 TGFBR3LH3BV60 316 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 ERVH48-1M5A8F1 160 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 EEDO75530 441 aaKnown RBP7.27□□□□□ -1.25
CPSF4-202ENST00000412686 PDYNP01213 254 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 GBAP04062 536 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 PDGFAP04085 211 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 ITGB2P05107 769 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 CHRNGP07510 517 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 HEXBP07686 556 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 COX6A1P12074 109 aa7.27□□□□□ -1.25
CPSF4-202ENST00000412686 H2AFXP16104 143 aaPredicted RBP7.27□□□□□ -1.25
CPSF4-202ENST00000412686 MMP11P24347 488 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms