RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ATOH7Q8N100 152 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRRC75A-AS1Q8N1F1 130 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 GHDCQ8N2G8 530 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRRC52Q8N7C0 313 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 C4orf32Q8N8J7 132 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF565Q8N9K5 539 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMEM178AQ8NBL3 297 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 B3GNT7Q8NFL0 401 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 STEAP2Q8NFT2 490 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR5M9Q8NGP3 310 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF420Q8TAQ5 688 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 KIAA1524Q8TCG1 905 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 URGCPQ8TCY9 931 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 MAIP1Q8WWC4 291 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 NXPE2Q96DL1 559 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CELF6Q96J87 481 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 FAM210BQ96KR6 192 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CEP170P1Q96L14 293 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CASD1Q96PB1 797 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TNFRSF13CQ96RJ3 184 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 NUP88Q99567 741 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 NPAS2Q99743 824 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 DUSP9Q99956 384 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PELOQ9BRX2 385 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 RBM24Q9BX46 236 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TDRD1Q9BXT4 1180 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCSER2Q9H7U1 834 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TUBA4BQ9H853 241 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 UGT1A7Q9HAW7 530 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ERVK-5Q9HDB9 667 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SIX2Q9NPC8 291 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 NMRK2Q9NPI5 230 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 DAZ3Q9NR90 486 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SEPT11Q9NVA2 429 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 HOXC10Q9NYD6 342 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TAS2R1Q9NYW7 299 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 BTNL2Q9UIR0 455 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 GGT7Q9UJ14 662 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMPRSS11EQ9UL52 423 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TRPC5Q9UL62 973 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 KCNS2Q9ULS6 477 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 POLHQ9Y253 713 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 KLF13Q9Y2Y9 288 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 MEMO1Q9Y316 297 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 IPPQ9Y573 584 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 MYO7BQ6PIF6 2116 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 USP34Q70CQ2 3546 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 AHDC1Q5TGY3 1603 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PLXNA1Q9UIW2 1896 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 BCL9O00512 1426 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 METP08581 1390 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 LOC105371242A0A075B767 164 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV3OR16-8A0A075B7F1 116 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV1OR21-1A0A087WYE8 117 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF98A6NK75 572 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 VSTM2BA6NLU5 285 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 C12orf71A8MTZ7 269 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF705GA8MUZ8 300 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 MAGEB17A8MXT2 336 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 FAM157AC9JC47 383 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 H3BNG1 76 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 EIF3DO15371 548 aaKnown RBP eCLIP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 SPINT2O43291 252 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 SH2D1AO60880 128 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 TSC22D2O75157 780 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 MMP23AO75900 390 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 SEMA3DO95025 777 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 VENTXO95231 258 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CH25HO95992 272 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 TGFAP01135 160 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGLV3-27P01718 113 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 KLK1P06870 262 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 P4HBP07237 508 aaKnown RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 LYNP07948 512 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 PPIAL4GP0DN37 164 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCL5P13501 91 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF35P13682 527 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 HSD3B1P14060 373 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 XRCC1P18887 633 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 SSTR2P30874 369 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CD79BP40259 229 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 OPRL1P41146 370 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 MATKP42679 507 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CEBPDP49716 269 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 GSK3BP49841 420 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 PLK1P53350 603 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 GPC5P78333 572 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ECT2LQ008S8 904 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 BTKQ06187 659 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 OS9Q13438 667 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 TSTA3Q13630 321 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 MORC3Q14149 939 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CASP8Q14790 479 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZSCAN26Q16670 478 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCDC57Q2TAC2 916 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 MGAT5BQ3V5L5 792 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 KLHL26Q53HC5 615 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CT47A1Q5JQC4 288 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ARHGEF16Q5VV41 709 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 FBXW9Q5XUX1 488 aa-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms