RNA–Protein interactions for RNA: ENST00000409617.5

SERF2-208, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-208	ENST00000409617	RPS13	P62277	151 aa	Known RBP	13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	KLC1	Q07866	573 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	IFT88	Q13099	833 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	CUL3	Q13618	768 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	DDX39B	Q13838	428 aa	Known RBP	13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	MPP2	Q14168	576 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	TTC19	Q6DKK2	380 aa	Predicted RBP	13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	LAPTM4B	Q86VI4	370 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	RAB43	Q86YS6	212 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	SHISA5	Q8N114	240 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	RNF175	Q8N4F7	328 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	OR5T3	Q8NGG3	340 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	IP6K3	Q96PC2	410 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	KCNC2	Q96PR1	638 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	OR1F2P	Q96R84	312 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	SERINC2	Q96SA4	455 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	TRMO	Q9BU70	441 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	ROGDI	Q9GZN7	287 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	OR51B5	Q9H339	312 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	ELOVL6	Q9H5J4	265 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	SOX17	Q9H6I2	414 aa	Predicted RBP	13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	SEMA3G	Q9NS98	782 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	POLH	Q9Y253	713 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	SCN3A	Q9NY46	2000 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	ZZEF1	O43149	2961 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	EPG5	Q9HCE0	2579 aa		13.96	□□□□□ -0.17
SERF2-208	ENST00000409617	LAMA5	O15230	3695 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	CCDC88C	Q9P219	2028 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	NPHS1	O60500	1241 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	SCEL	O95171	688 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	ZWINT	O95229	277 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	CYC1	P08574	325 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	TSFM	P43897	325 aa	Known RBP	13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	XCR1	P46094	333 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	SLC18A1	P54219	525 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	MTTP	P55157	894 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	RHD	Q02161	417 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	ZNF33B	Q06732	778 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	RUNX2	Q13950	521 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	AGBL2	Q5U5Z8	902 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	SHISA6	Q6ZSJ9	500 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	CA13	Q8N1Q1	262 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	CDYL2	Q8N8U2	506 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	OR6Y1	Q8NGX8	325 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	METTL6	Q8TCB7	284 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	RGMA	Q96B86	450 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	MTFMT	Q96DP5	389 aa	Known RBP	13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	SERPINI1	Q99574	410 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	CENPK	Q9BS16	269 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	CRB3	Q9BUF7	120 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	MECR	Q9BV79	373 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	BRF2	Q9HAW0	419 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	MID1IP1	Q9NPA3	183 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	KCNK9	Q9NPC2	374 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	C3orf18	Q9UK00	162 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617	CACNA1B	Q00975	2339 aa		13.95	□□□□□ -0.18
SERF2-208	ENST00000409617		A0A0G2JN53	185 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SERTM1	A2A2V5	107 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	IDS	B3KWA1	339 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	MANBA	O00462	879 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	PCDH17	O14917	1159 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	BIRC5	O15392	142 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	B3GALT2	O43825	422 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SH3BGRL	O75368	114 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	ETHE1	O95571	254 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	PDYN	P01213	254 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	KRT6A	P02538	564 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	KRT6B	P04259	564 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	HSD3B1	P14060	373 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	ATP5A1	P25705	553 aa	Known RBP	13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	HSD3B2	P26439	372 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	OTX2	P32243	289 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SERPINB5	P36952	375 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	CCR10	P46092	362 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SERPINB4	P48594	390 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	KRT6C	P48668	564 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	EMP2	P54851	167 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	MAGOH	P61326	146 aa	Known RBP	13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	OLR1	P78380	273 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	GALNT1	Q10472	559 aa	Predicted RBP	13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	TBR1	Q16650	682 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	AP5B1	Q2VPB7	878 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	DEFB109B	Q30KR1	87 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	OR4C11	Q6IEV9	310 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	ZNF793	Q6ZN11	406 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	PPP1R32	Q7Z5V6	425 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	MRGPRE	Q86SM8	312 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	PRSS58	Q8IYP2	241 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	ACOT4	Q8N9L9	421 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	PLPP5	Q8NEB5	264 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SELENOM	Q8WWX9	145 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SREK1	Q8WXA9	508 aa	Known RBP	13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	TTC9	Q92623	222 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	TBC1D20	Q96BZ9	403 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	PEX11G	Q96HA9	241 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SH3GL2	Q99962	352 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	PRM3	Q9NNZ6	103 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	LANCL2	Q9NS86	450 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	FARSB	Q9NSD9	589 aa	Known RBP	13.94	□□□□□ -0.18

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