RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 SFTPDP35247 375 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 TMEM225Q6GV28 225 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 OR51A7Q8NH64 312 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 HUS1BQ8NHY5 278 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 BRF2Q9HAW0 419 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 SCGNO76038 276 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 RENP00797 406 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 ITGA1P56199 1179 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 SPIN4Q56A73 249 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 THAP5Q7Z6K1 395 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 ARRDC3Q96B67 414 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 SPATA7Q9P0W8 599 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 SPIN1Q9Y657 262 aaPredicted RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 MAGEA11P43364 429 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 SPINT3P49223 89 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 ZNF41P51814 821 aaPredicted RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 MAP4K2Q12851 820 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 COX4I2Q96KJ9 171 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 CNDP2Q96KP4 475 aaKnown RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 INPP5KQ9BT40 448 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 UCKL1Q9NWZ5 548 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 PMF1-BGLAPU3KQ54 211 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 ANXA2P2A6NMY6 339 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 ANXA2P07355 339 aaKnown RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 CLRN1P58418 232 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 CDK6Q00534 326 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 SGCAQ16586 387 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 TMEM151BQ8IW70 566 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 NUP43Q8NFH3 380 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 PBX4Q9BYU1 374 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 DERL2Q9GZP9 239 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 TRPS1Q9UHF7 1281 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 FARSAQ9Y285 508 aaKnown RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 FAM221BA6H8Z2 402 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 ALDOAP04075 364 aaKnown RBP13.16□□□□□ -0.3
PSME4-202ENST00000404125 PGAM2P15259 253 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 PRPS1L1P21108 318 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 GPR4P46093 362 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 GALK2Q01415 458 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 EXOC3L2Q2M3D2 409 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 ZCCHC12Q6PEW1 402 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 CSNK1A1LQ8N752 337 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 HSH2DQ96JZ2 352 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 FOXQ1Q9C009 403 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 MOCS1Q9NZB8 636 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 MKLN1Q9UL63 735 aa13.16□□□□□ -0.3
PSME4-202ENST00000404125 MYF5P13349 255 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 NAA10P41227 235 aaPredicted RBP13.15□□□□□ -0.3
PSME4-202ENST00000404125 PPP3R1P63098 170 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 MEP1AQ16819 746 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 SLC15A3Q8IY34 581 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 OR8S1Q8NH09 359 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 KHSRPQ92945 711 aaKnown RBP eCLIP13.15□□□□□ -0.35e-7■■■□□ 17.2
PSME4-202ENST00000404125 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 HAT1O14929 419 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 SCGB1D2O95969 90 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 SOX2P48431 317 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 CNTD1Q8N815 330 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 RADILQ96JH8 1075 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 ZNF514Q96K75 400 aaPredicted RBP13.15□□□□□ -0.3
PSME4-202ENST00000404125 SLC2A4RGQ9NR83 387 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 CAPGP40121 348 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 RGRP47804 291 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 HCAR3P49019 387 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 CSNK1EP49674 416 aaKnown RBP13.15□□□□□ -0.3
PSME4-202ENST00000404125 DECR1Q16698 335 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 CHFRQ96EP1 664 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 ATXN10Q9UBB4 475 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 AP3M1Q9Y2T2 418 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 H0YGN5 161 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 OR2B6P58173 313 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 ZDHHC12Q96GR4 267 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 CGREF1Q99674 301 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 POU2F3Q9UKI9 436 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 TRPM3Q9HCF6 1732 aaPredicted RBP13.15□□□□□ -0.3
PSME4-202ENST00000404125 S1PR4O95977 384 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 CERS1P27544 350 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 MAT1AQ00266 395 aaKnown RBP13.15□□□□□ -0.3
PSME4-202ENST00000404125 OR5D16Q8NGK9 328 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 TPT1P8Q9HAU6 139 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 TBC1D24Q9ULP9 559 aa13.15□□□□□ -0.3
PSME4-202ENST00000404125 FAM172BPA6NC97 362 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 H3BML4 177 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 CD1DP15813 335 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 TSSK4Q6SA08 328 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
PSME4-202ENST00000404125 OR6N1Q8NGY5 312 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 HM13Q8TCT9 377 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 CCDC120Q96HB5 630 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 SRA1Q9HD15 236 aaKnown RBP13.14□□□□□ -0.31
PSME4-202ENST00000404125 SPARCP09486 303 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 ZNF3P17036 446 aa13.14□□□□□ -0.31
PSME4-202ENST00000404125 OR4D2P58180 307 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms