RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SPNS1Q9H2V7 528 aa12.15□□□□□ -0.46
PPP4R1-202ENST00000400555 DUSP21Q9H596 190 aa12.15□□□□□ -0.46
PPP4R1-202ENST00000400555 MALT1Q9UDY8 824 aa12.15□□□□□ -0.46
PPP4R1-202ENST00000400555 PRAMEF33A0A0G2JMD5 474 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC28A2O43868 658 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PRAMEF10O60809 474 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 VIPR1P32241 457 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 TGM4P49221 684 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 NKX3-2P78367 333 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 CDKN3Q16667 212 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 LIPJQ5W064 366 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 L3MBTL4Q8NA19 623 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 INIPQ9NRY2 104 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 TAC3Q9UHF0 121 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 MAN2B2Q9Y2E5 1009 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PMF1-BGLAPU3KQ54 211 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 NLRC5Q86WI3 1866 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 EFCAB10A6NFE3 127 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 TRIM64A6NGJ6 449 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 IFNW1P05000 195 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 GPX2P18283 190 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 SOX3P41225 446 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC6A12P48065 614 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PPM1FP49593 454 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 IL18R1Q13478 541 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 ARMCX6Q7L4S7 300 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PRSS48Q7RTY5 328 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC39A11Q8N1S5 342 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PXYLP1Q8TE99 480 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 NACC2Q96BF6 587 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 COL21A1Q96P44 957 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 KCNK12Q9HB15 430 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 TDP1Q9NUW8 608 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 H7BY64 318 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 JRKO75564 520 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 CCNB2O95067 398 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 RPLP0P05388 317 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 ITGAMP11215 1152 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 SOX6P35712 828 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 GZMMP51124 257 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 SELENOWP63302 87 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 CASP12Q6UXS9 341 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PLEKHG7Q6ZR37 379 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 RBM45Q8IUH3 476 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 RBM12BQ8IXT5 1001 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 B3GNT7Q8NFL0 401 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 PRAP1Q96NZ9 151 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 REEP4Q9H6H4 257 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 CLN6Q9NWW5 311 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 LYVE1Q9Y5Y7 322 aa12.14□□□□□ -0.47
PPP4R1-202ENST00000400555 TRBV23OR9-2A0A075B6M9 112 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ANTXRLA6NF34 631 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 RFXAPO00287 272 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ASNA1O43681 348 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 KRT8P05787 483 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 C8orf89P0DMQ9 161 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 TIMP2P16035 220 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 CD40LGP29965 261 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 BUD31P41223 144 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 RFX3P48380 749 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 MAPK12P53778 367 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 KCNJ10P78508 379 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ZNF763Q0D2J5 394 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 TARDBPQ13148 414 aaKnown RBP eCLIP12.13□□□□□ -0.474e-8■■■■■ 27.5
PPP4R1-202ENST00000400555 FXNQ16595 210 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 DUSP7Q16829 419 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 C10orf62Q5T681 223 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ARMC8Q8IUR7 673 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 TCEAL8Q8IYN2 117 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 DNAJB8Q8NHS0 232 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 UBTD2Q8WUN7 234 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 COL26A1Q96A83 441 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ZNF282Q9UDV7 671 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 KCNE1BA0A087WTH5 132 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 A6NL46 340 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 KIAA0513O60268 411 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 PSMB5P28074 263 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 RCVRNP35243 200 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ITGA1P56199 1179 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ARMC4Q5T2S8 1044 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 GRASPQ7Z6J2 395 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 TCEANCQ8N8B7 351 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 XKR8Q9H6D3 395 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 TIGARQ9NQ88 270 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 NECTIN3Q9NQS3 549 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 ERVW-1Q9UQF0 538 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 SNX4O95219 450 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 NR2F1P10589 423 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 GRK5P34947 590 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 GSTM4Q03013 218 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 MLLT1Q03111 559 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 PTGES3Q15185 160 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 CLEC12AQ5QGZ9 265 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 MMAAQ8IVH4 418 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms