RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MLNRO43193 412 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 SYT7O43581 403 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 EDIL3O43854 480 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 PRDM1O75626 825 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 ODC1P11926 461 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 TYMPP19971 482 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 FCARP24071 287 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 OR1D2P34982 312 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 NR0B1P51843 470 aaKnown RBP2.36□□□□□ -2.03
CD47-203ENST00000398258 IRX4P78413 519 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 FAM106AQ4KMX7 169 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 ATP1A1-AS1Q5TC04 95 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 ARHGAP11AQ6P4F7 1023 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 TRMT11Q7Z4G4 463 aaKnown RBP2.36□□□□□ -2.03
CD47-203ENST00000398258 TMEM126BQ8IUX1 230 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 CROCCP3Q8IVE0 287 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 SLC22A15Q8IZD6 547 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 ZNF619Q8N2I2 560 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 CCDC185Q8N715 623 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 TMEM178AQ8NBL3 297 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 CLEC1AQ8NC01 280 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 GPRC5AQ8NFJ5 357 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 MAPK15Q8TD08 544 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 SEPT8Q92599 483 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 CCDC47Q96A33 483 aaKnown RBP2.36□□□□□ -2.03
CD47-203ENST00000398258 OMA1Q96E52 524 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 C2orf48Q96LS8 159 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 DUX3Q96PT4 197 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 NEDD4LQ96PU5 975 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 ZNF300Q96RE9 604 aaPredicted RBP2.36□□□□□ -2.03
CD47-203ENST00000398258 IL12RB2Q99665 862 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 SPXQ9BT56 116 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 LRRC2Q9BYS8 371 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 HOXD1Q9GZZ0 328 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 CUEDC2Q9H467 287 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 MTHFD2LQ9H903 347 aaPredicted RBP2.36□□□□□ -2.03
CD47-203ENST00000398258 ATAD3AQ9NVI7 634 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 UBQLN2Q9UHD9 624 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 GMEB2Q9UKD1 530 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 KCNK6Q9Y257 313 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 WDR37Q9Y2I8 494 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 NSG2Q9Y328 171 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 MYH14Q7Z406 1995 aaKnown RBP2.36□□□□□ -2.03
CD47-203ENST00000398258 LMO7DNF2Z398 122 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 NR5A2O00482 541 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 CCSO14618 274 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 SURF4O15260 269 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 TLX2O43763 284 aaPredicted RBP2.35□□□□□ -2.03
CD47-203ENST00000398258 BCAS2O75934 225 aaPredicted RBP2.35□□□□□ -2.03
CD47-203ENST00000398258 STBD1O95210 358 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 CXCL14O95715 111 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 FGF19O95750 216 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 IGLV1-44P01699 117 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 HMBSP08397 361 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 ABHD2P08910 425 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 HMOX1P09601 288 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 ANPEPP15144 967 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 ZNF26P17031 533 aaPredicted RBP2.35□□□□□ -2.03
CD47-203ENST00000398258 IL10P22301 178 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 MAP2K2P36507 400 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 NT5C2P49902 561 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 TNFSF10P50591 281 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 SLC12A3P55017 1021 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 PAX9P55771 341 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 CNTN1Q12860 1018 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 CDH18Q13634 790 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 CEACAM7Q14002 265 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 GK2Q14410 553 aaPredicted RBP2.35□□□□□ -2.03
CD47-203ENST00000398258 MEF2DQ14814 521 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 TMEM132DQ14C87 1099 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 STX1AQ16623 288 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 IFI44LQ53G44 452 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 PARP10Q53GL7 1025 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 SPANXN4Q5MJ08 99 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 FFAR4Q5NUL3 377 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 B3GLCTQ6Y288 498 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 Q6ZRP5 223 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 NLRP14Q86W24 1093 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 C17orf64Q86WR6 236 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 HOGA1Q86XE5 327 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 CATSPERDQ86XM0 798 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 SERPINA12Q8IW75 414 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 DND1Q8IYX4 353 aaKnown RBP2.35□□□□□ -2.03
CD47-203ENST00000398258 FBXW8Q8N3Y1 598 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 CHCHD4Q8N4Q1 142 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 DDHD1Q8NEL9 900 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 C8orf46Q8TAG6 207 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 ST7LQ8TDW4 575 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 SMAP2Q8WU79 429 aaPredicted RBP2.35□□□□□ -2.03
CD47-203ENST00000398258 HAS2Q92819 552 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 FAM46BQ96A09 425 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 SLC35C1Q96A29 364 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 RFT1Q96AA3 541 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 ULK4Q96C45 1275 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 BPIFA2Q96DR5 249 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 PCDHB18PQ96TA0 734 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 S1PR3Q99500 378 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 SSX3Q99909 188 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 DDX50Q9BQ39 737 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms