RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SRCP12931 536 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CBLP22681 906 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CTGFP29279 349 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 AQP1P29972 269 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 VIPR1P32241 457 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 TGFBR1P36897 503 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 RECQLP46063 649 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 RPS5P46782 204 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 NUDT6P53370 316 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 RAE1P78406 368 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 GAB1Q13480 694 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 NAE1Q13564 534 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 NCF4Q15080 339 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 PTGES3Q15185 160 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 TSTQ16762 297 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ZXDCQ2QGD7 858 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 DGKKQ5KSL6 1271 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ARMC4Q5T2S8 1044 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 GDPD3Q7L5L3 318 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 RAB43Q86YS6 212 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC22A15Q8IZD6 547 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 HS6ST3Q8IZP7 471 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 OR8H2Q8N162 312 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 IL17RDQ8NFM7 739 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 DBF4BQ8NFT6 615 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 OR7G3Q8NG95 312 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 WFDC5Q8TCV5 224 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 MRPS31Q92665 395 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CENPOQ9BU64 300 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ABCG8Q9H221 673 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 STARD7Q9NQZ5 370 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 MRPL17Q9NRX2 175 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 TAS2R9Q9NYW1 312 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 POU2F3Q9UKI9 436 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 RPL36Q9Y3U8 105 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 PSMD11O00231 422 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CAPN5O15484 640 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 PRAMEF4O60810 478 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC10A3P09131 477 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CD22P20273 847 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CHMP24386 653 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 GKP32189 559 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 LIMS1P48059 325 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CRYBA2P53672 197 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 BNC1Q01954 994 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 PRKCZQ05513 592 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 PDE7AQ13946 482 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF284Q2VY69 593 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 PRAMEF9Q5VWM5 478 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CST9Q5W186 159 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 THOC7Q6I9Y2 204 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CASP12Q6UXS9 341 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 TMPRSS11AQ6ZMR5 421 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 VRK3Q8IV63 474 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 BBS7Q8IWZ6 715 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 RAVER1Q8IY67 606 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 LINC00471Q8N535 108 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ARL14EPQ8N8R7 260 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 HUS1BQ8NHY5 278 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 NFKBIDQ8NI38 313 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 MAL2Q969L2 176 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 WDR34Q96EX3 536 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 TMEM80Q96HE8 168 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 NIPSNAP1Q9BPW8 284 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 CLSTN3Q9BQT9 956 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ZDHHC6Q9H6R6 413 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 AMBNQ9NP70 447 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ASAH2Q9NR71 780 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ACER3Q9NUN7 267 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 SPATA7Q9P0W8 599 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 STUB1Q9UNE7 303 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 SSR3Q9UNL2 185 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF451Q9Y4E5 1061 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC35F4A4IF30 521 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ARHGEF33A8MVX0 844 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 C5orf58C9J3I9 102 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 GREM1O60565 184 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF821O75541 412 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 SOD2P04179 222 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ETFAP13804 333 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF24P17028 368 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 RPL17P18621 184 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 LHCGRP22888 699 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 DDOSTP39656 456 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 GATMP50440 423 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FPGSQ05932 587 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 SCN1BQ07699 218 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 RAB33AQ14088 237 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 TMEM201Q5SNT2 666 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 FRMPD2BQ6IN97 320 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 GDPD4Q6W3E5 623 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF517Q6ZMY9 492 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.874e-11■□□□□ 10.1
UBE2D3-208ENST00000394803 TCEAL8Q8IYN2 117 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 UBQLNLQ8IYU4 475 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 CYP4Z2PQ8N1L4 340 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 AQP11Q8NBQ7 271 aa9.62□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms