RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CHST15Q7LFX5 561 aaPredicted RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 VTCN1Q7Z7D3 282 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 C2orf73Q8N5S3 287 aaPredicted RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 PIK3C3Q8NEB9 887 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 ISOC1Q96CN7 298 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 TPD52L3Q96J77 140 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 MBNL1Q9NR56 388 aaKnown RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 TM7SF3Q9NS93 570 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 ICKQ9UPZ9 632 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 ANTXRLA6NF34 631 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 hCG_2039718K7EN88 272 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 LAMP2P13473 410 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 CRHBPP24387 322 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 CHI3L1P36222 383 aaPredicted RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 PIGAP37287 484 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 YAP1P46937 504 aaKnown RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 VLDLRP98155 873 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 MC1RQ01726 317 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 PMS2P3Q13401 168 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 IRF4Q15306 451 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 CLPPQ16740 277 aaPredicted RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 SMUG1Q53HV7 270 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 GCNT6Q5T4J0 391 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 ZNF691Q5VV52 312 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 KIAA1161Q6NSJ0 714 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
VPS16-202ENST00000380445 IQCF2Q8IXL9 164 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 MRPL38Q96DV4 380 aaKnown RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 FERD3LQ96RJ6 166 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 MYADMQ96S97 322 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 RAB11FIP5Q9BXF6 653 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 PBX4Q9BYU1 374 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 TMEM38AQ9H6F2 299 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 MSRAQ9UJ68 235 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 PADI2Q9Y2J8 665 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 SAMHD1Q9Y3Z3 626 aaKnown RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 OR1A2Q9Y585 309 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 CFAP20Q9Y6A4 193 aaKnown RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 HSPE1-MOB4S4R3N1 261 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 TRPM6Q9BX84 2022 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 ABCB7O75027 752 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 IFNA14P01570 189 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 IL3P08700 152 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 NUDT7P0C024 238 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 SELENOWP63302 87 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 CTBSQ01459 385 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 RAB39AQ14964 217 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 C16orf72Q14CZ0 275 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 HEPACAMQ14CZ8 416 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 VN1R5Q7Z5H4 357 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 SLC30A8Q8IWU4 369 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 GANCQ8TET4 914 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 GIPC3Q8TF64 312 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 MS4A8Q9BY19 250 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 RAPGEFL1Q9UHV5 662 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 BCKDKO14874 412 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 TNFRSF21O75509 655 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 CPNE6O95741 557 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 JUNBP17275 347 aaPredicted RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 MAPK12P53778 367 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 NUP107P57740 925 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 ISL1P61371 349 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 REEP5Q00765 189 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 IER5LQ5T953 404 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 KDM4DQ6B0I6 523 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 PARM1Q6UWI2 310 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 CHDHQ8NE62 594 aaPredicted RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 MAGED4Q96JG8 741 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 C12orf66Q96MD2 445 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 MENTQ9BUN1 341 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 C1QTNF2Q9BXJ5 285 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 NKX2-4Q9H2Z4 354 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 OSGEPL1Q9H4B0 414 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 RUBCNLQ9H714 662 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 FBRSQ9HAH7 460 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 VNN3Q9NY84 501 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 PDP1Q9P0J1 537 aaPredicted RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 KIF17Q9P2E2 1029 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 SERGEFQ9UGK8 458 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 PCDHGB3Q9Y5G1 929 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 PLPP1O14494 284 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 CAPN5O15484 640 aaPredicted RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 TBX19O60806 448 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 NOL3O60936 208 aaKnown RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 JRKO75564 520 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 C9P02748 559 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 TIE1P35590 1138 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 TMED10P49755 219 aaKnown RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 MVDP53602 400 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 KCNJ10P78508 379 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 TUBA3CQ13748 450 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 KEAP1Q14145 624 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 ZNF630Q2M218 657 aaPredicted RBP12.06□□□□□ -0.48
VPS16-202ENST00000380445 GALNT10Q86SR1 603 aa12.06□□□□□ -0.48
VPS16-202ENST00000380445 ZC3H7AQ8IWR0 971 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms