RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GALNT1Q10472 559 aaPredicted RBP12.52□□□□□ -0.4
CKAP2-202ENST00000378034 IL10RAQ13651 578 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 MED25Q71SY5 747 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 METTL6Q8TCB7 284 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 RGMAQ96B86 450 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 VPS50Q96JG6 964 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 COPS7BQ9H9Q2 264 aaPredicted RBP12.52□□□□□ -0.4
CKAP2-202ENST00000378034 BRF2Q9HAW0 419 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 MID1IP1Q9NPA3 183 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 PRDM7Q9NQW5 492 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 ACSS2Q9NR19 701 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 NMRK1Q9NWW6 199 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 HCN3Q9P1Z3 774 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 POLHQ9Y253 713 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 SCN3AQ9NY46 2000 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 ZFHX4Q86UP3 3567 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 PTPRQQ9UMZ3 2332 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 PKD1L2Q7Z442 2459 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 CDC14CA4D256 554 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 C4orf51C9J302 202 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 FFAR3O14843 346 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 GPR42O15529 346 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 CHST10O43529 356 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 B3GALT2O43825 422 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 SEMA3DO95025 777 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 SCELO95171 688 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 DHRS4L1P0CG22 281 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 MMP11P24347 488 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 HMOX2P30519 316 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 XCR1P46094 333 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 SERPINB4P48594 390 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 NEK2P51955 445 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 RAP1GDS1P52306 607 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 PLA2G16P53816 162 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 MAGOHP61326 146 aaKnown RBP12.52□□□□□ -0.41
CKAP2-202ENST00000378034 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.41
CKAP2-202ENST00000378034 KLC1Q07866 573 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 SYT16Q17RD7 645 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 AP5B1Q2VPB7 878 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 VWA2Q5GFL6 755 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 NUDCD3Q8IVD9 361 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 ZC3H7AQ8IWR0 971 aaKnown RBP12.52□□□□□ -0.41
CKAP2-202ENST00000378034 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 CDYL2Q8N8U2 506 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 ADAMTS18Q8TE60 1221 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 SELENOMQ8WWX9 145 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 OR51B5Q9H339 312 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 SOX17Q9H6I2 414 aaPredicted RBP12.52□□□□□ -0.41
CKAP2-202ENST00000378034 CCDC88CQ9P219 2028 aa12.52□□□□□ -0.41
CKAP2-202ENST00000378034 EPG5Q9HCE0 2579 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 SERTM1A2A2V5 107 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 MANBAO00462 879 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 UBFD1O14562 309 aaKnown RBP12.51□□□□□ -0.41
CKAP2-202ENST00000378034 ULK1O75385 1050 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 PRKAR1AP10644 381 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 RNH1P13489 461 aaKnown RBP12.51□□□□□ -0.41
CKAP2-202ENST00000378034 JAK1P23458 1154 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 RHDQ02161 417 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 RCN2Q14257 317 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 OR4C11Q6IEV9 310 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 UBE3DQ7Z6J8 389 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 ZBTB9Q96C00 473 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 MTFMTQ96DP5 389 aaKnown RBP12.51□□□□□ -0.41
CKAP2-202ENST00000378034 SH3GL2Q99962 352 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 CRB3Q9BUF7 120 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 MECRQ9BV79 373 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 EML4Q9HC35 981 aaKnown RBP12.51□□□□□ -0.41
CKAP2-202ENST00000378034 AHSPQ9NZD4 102 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 ZZEF1O43149 2961 aa12.51□□□□□ -0.41
CKAP2-202ENST00000378034 ZNF860A6NHJ4 632 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 B3GALT4O96024 378 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 PDYNP01213 254 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 HEXBP07686 556 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 ATP5A1P25705 553 aaKnown RBP12.5□□□□□ -0.41
CKAP2-202ENST00000378034 EMP2P54851 167 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 CSTF3Q12996 717 aaKnown RBP12.5□□□□□ -0.41
CKAP2-202ENST00000378034 MPP2Q14168 576 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 TUBB8Q3ZCM7 444 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 CA13Q8N1Q1 262 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 RNF175Q8N4F7 328 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 GBP7Q8N8V2 638 aaPredicted RBP12.5□□□□□ -0.41
CKAP2-202ENST00000378034 OR5T3Q8NGG3 340 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 OR6Y1Q8NGX8 325 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 PEX11GQ96HA9 241 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 CRELD1Q96HD1 420 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 ATP6V1G3Q96LB4 118 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 ACBD3Q9H3P7 528 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 LYRM4Q9HD34 91 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 C3orf18Q9UK00 162 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 NUP210LQ5VU65 1888 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 TMEM120BA0PK00 339 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 IDSB3KWA1 339 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
CKAP2-202ENST00000378034 PEX12O00623 359 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 PLPP1O14494 284 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 CRCPO75575 148 aa12.5□□□□□ -0.41
CKAP2-202ENST00000378034 SNUPNO95149 360 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms