RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TUBA1CQ9BQE3 449 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 MENTQ9BUN1 341 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 S1PR5Q9H228 398 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 RHBGQ9H310 441 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 FANCEQ9HB96 536 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 THUMPD1Q9NXG2 353 aaKnown RBP19.33■□□□□ 0.69
VSX1-202ENST00000376709 SPATA7Q9P0W8 599 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 MAP4K5Q9Y4K4 846 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 FEZF1A0PJY2 475 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 LATO43561 262 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 CPNE6O95741 557 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 MAPK12P53778 367 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 FADDQ13158 208 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 SCARB2Q14108 478 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 FGL2Q14314 439 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 SLC5A12Q1EHB4 618 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 C2orf27AQ580R0 203 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 RNF130Q86XS8 419 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 ATG16L2Q8NAA4 619 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 SPPL2AQ8TCT8 520 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 NRBF2Q96F24 287 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 F2RL3Q96RI0 385 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 WASH6PQ9NQA3 447 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 EXD2Q9NVH0 621 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 WDR37Q9Y2I8 494 aa19.33■□□□□ 0.68
VSX1-202ENST00000376709 PLXND1Q9Y4D7 1925 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 RTCAO00442 366 aaKnown RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 TNFRSF21O75509 655 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 SEMA3DO95025 777 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 OPN1SWP03999 348 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 AGXTP21549 392 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 CALRP27797 417 aaKnown RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 RYKP34925 604 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 GALK1P51570 392 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 RPS21P63220 83 aaKnown RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 SELENOWP63302 87 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 RAPSNQ13702 412 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 SIM2Q14190 667 aaPredicted RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 DEPDC1Q5TB30 811 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 PAGE2Q7Z2X7 111 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 TP53I13Q8NBR0 393 aaPredicted RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 SETD9Q8NE22 299 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 ABHD11Q8NFV4 315 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 ZNF420Q8TAQ5 688 aaPredicted RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 C7orf34Q96L11 122 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 MS4A8Q9BY19 250 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 TIMMDC1Q9NPL8 285 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 FBXL12Q9NXK8 326 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 LMCD1Q9NZU5 365 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 TAAR2Q9P1P5 351 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 TBX6O95947 436 aaPredicted RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 CDK4P11802 303 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 GABARAPL2P60520 117 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 RBBP4Q09028 425 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 ADAM15Q13444 863 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 TOP3AQ13472 1001 aaPredicted RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 PRSS53Q2L4Q9 553 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 C11orf91Q3C1V1 193 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 FAM180BQ6P0A1 224 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 OR14C36Q8NHC7 312 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 NFKBIDQ8NI38 313 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 SGCDQ92629 289 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 RAD21L1Q9H4I0 556 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 KRT84Q9NSB2 600 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 IMP3Q9NV31 184 aaKnown RBP19.32■□□□□ 0.68
VSX1-202ENST00000376709 KCNK6Q9Y257 313 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 PADI2Q9Y2J8 665 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 SNX8Q9Y5X2 465 aa19.32■□□□□ 0.68
VSX1-202ENST00000376709 SLC1A7O00341 560 aa19.31■□□□□ 0.68
VSX1-202ENST00000376709 GCM2O75603 506 aaPredicted RBP19.31■□□□□ 0.68
VSX1-202ENST00000376709 C9P02748 559 aa19.31■□□□□ 0.68
VSX1-202ENST00000376709 DCKP27707 260 aa19.31■□□□□ 0.68
VSX1-202ENST00000376709 ALDH9A1P49189 494 aa19.31■□□□□ 0.68
VSX1-202ENST00000376709 ADCK2Q7Z695 626 aa19.31■□□□□ 0.68
VSX1-202ENST00000376709 EZH1Q92800 747 aaPredicted RBP19.31■□□□□ 0.68
VSX1-202ENST00000376709 INSM2Q96T92 566 aaPredicted RBP19.31■□□□□ 0.68
VSX1-202ENST00000376709 TMEM121BQ9BXQ6 578 aaPredicted RBP19.31■□□□□ 0.68
VSX1-202ENST00000376709 MOSPD1Q9UJG1 213 aa19.31■□□□□ 0.68
VSX1-202ENST00000376709 A0A1W2PPV9 198 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 TMX2-CTNND1H3BSU7 103 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 NOL3O60936 208 aaKnown RBP19.3■□□□□ 0.68
VSX1-202ENST00000376709 JRKO75564 520 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 KRT75O95678 551 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 FUCA1P04066 466 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 DDCP20711 480 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 TEAD1P28347 426 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 RXRGP48443 463 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 REEP5Q00765 189 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 DMPKQ09013 629 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 KIAA1211LQ6NV74 962 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 ZC3H7AQ8IWR0 971 aaKnown RBP19.3■□□□□ 0.68
VSX1-202ENST00000376709 LINC01555Q8NAE3 123 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 BPIFB6Q8NFQ5 453 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 CNIH3Q8TBE1 160 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 LZICQ8WZA0 190 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 DCUN1D5Q9BTE7 237 aa19.3■□□□□ 0.68
VSX1-202ENST00000376709 ZNF717Q9BY31 904 aaPredicted RBP19.3■□□□□ 0.68
VSX1-202ENST00000376709 NAA50Q9GZZ1 169 aaKnown RBP19.3■□□□□ 0.68
VSX1-202ENST00000376709 MKRN2Q9H000 416 aaKnown RBP19.3■□□□□ 0.68
VSX1-202ENST00000376709 TMEM38AQ9H6F2 299 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms