RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PRKCHP24723 683 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 SSTR3P32745 418 aaPredicted RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 GNALP38405 381 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 PCP4P48539 62 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 MASTLQ96GX5 879 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 WWTR1Q9GZV5 400 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 MCCC2Q9HCC0 563 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 KLRC2P26717 231 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 ARL4DP49703 201 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 RAB35Q15286 201 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 PPP1R3AQ16821 1122 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 DHRS4L2Q6PKH6 230 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 CES3Q6UWW8 571 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 APH1BQ8WW43 257 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 SLC25A21Q9BQT8 299 aaPredicted RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 A0A1W2PRB8 838 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 SLC1A7O00341 560 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 FMO6PO60774 539 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 CRHBPP24387 322 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 TAGLN2P37802 199 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 CHRNA4P43681 627 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 CDH12P55289 794 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 HORMAD2Q8N7B1 307 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 NIPSNAP3BQ9BS92 247 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 NXF2Q9GZY0 626 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 PTPRHQ9HD43 1115 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 SLC7A4O43246 635 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 T-ENOLP0DO92 83 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 HTR2CP28335 458 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 RAB7AP51149 207 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 PKIAP61925 76 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 RPL38P63173 70 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 PHYHD1Q5SRE7 291 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 AFMIDQ63HM1 303 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 LDHDQ86WU2 507 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 FAM185AQ8N0U4 392 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 NAT8LQ8N9F0 302 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 TTLQ8NG68 377 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 OR2A12Q8NGT7 310 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 RSPRY1Q96DX4 576 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 PITHD1Q9GZP4 211 aaPredicted RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 OR51V1Q9H2C8 321 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 ASF1BQ9NVP2 202 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 PCDHB11Q9Y5F2 797 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 A0A1W2PP64 1363 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 UBFD1O14562 309 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 ELK4P28324 431 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 KCNQ1P51787 676 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 RNASE10Q5GAN6 216 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 TOR1AIP1Q5JTV8 583 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 RIPPLY2Q5TAB7 128 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 ZC3H14Q6PJT7 736 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 ANKLE1Q8NAG6 615 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 SYT14Q8NB59 555 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 THOC2Q8NI27 1593 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 CCKARP32238 428 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 MAP3K8P41279 467 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 HTD2P86397 168 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 ZNF33AQ06730 810 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 CHIT1Q13231 466 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 BCL7AQ4VC05 210 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 PPM1JQ5JR12 505 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 STT3BQ8TCJ2 826 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 TSEN15Q8WW01 171 aaKnown RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 AZIN2Q96A70 460 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 SPANXA1Q9NS26 97 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 ACSS1Q9NUB1 689 aaPredicted RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 ABI2Q9NYB9 513 aaPredicted RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 GNG13Q9P2W3 67 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 TNFSF8P32971 234 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 S100A10P60903 97 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 ZNF704Q6ZNC4 412 aaPredicted RBP6.4□□□□□ -1.38
UBR4-204ENST00000375254 LARP4Q71RC2 724 aaKnown RBP eCLIP6.4□□□□□ -1.385e-14■□□□□ 9.2
UBR4-204ENST00000375254 RSC1A1Q92681 617 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 TGM7Q96PF1 710 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 CERS4Q9HA82 394 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 PLCXD1Q9NUJ7 323 aa6.4□□□□□ -1.38
UBR4-204ENST00000375254 CYB561D2O14569 222 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ARMC12Q5T9G4 340 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ARL9Q6T311 187 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 PRSS42Q7Z5A4 293 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ILDR1Q86SU0 546 aaPredicted RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 SFXN2Q96NB2 322 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 NT5MQ9NPB1 228 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 NCAPD2Q15021 1401 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 HLA-HP01893 362 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ZNF280AP59817 542 aaPredicted RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 GTF2BQ00403 316 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 CREB5Q02930 508 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 GPAT4Q86UL3 456 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 MCATQ8IVS2 390 aaKnown RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 OR51L1Q8NGJ5 315 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 TAS2R14Q9NYV8 317 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 DNMT3LQ9UJW3 386 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 TMEM200CA6NKL6 621 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 PDYNP01213 254 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 CLK2P49760 499 aaKnown RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 GRIK4Q16099 956 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms