RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 C10orf82Q8WW14 230 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ZNF514Q96K75 400 aaPredicted RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 CCDC59Q9P031 241 aaKnown RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 TRAV6A0A075B6T7 132 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 MEIS3P2A8K0S8 358 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 LSM1O15116 133 aaKnown RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 SSX5O60225 188 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ELOCQ15369 112 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 MACROD1Q9BQ69 325 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 STRA6Q9BX79 667 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 NUSAP1Q9BXS6 441 aaKnown RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 CD244Q9BZW8 370 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ACSL6Q9UKU0 697 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 RPL36Q9Y3U8 105 aaKnown RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 MRC1P22897 1456 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 PLOD2O00469 737 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 TACSTD2P09758 323 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 FASLGP48023 281 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 MFSD5Q6N075 450 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 CILP2Q8IUL8 1156 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 F2RL3Q96RI0 385 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 PKP2Q99959 881 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ZNF350Q9GZX5 532 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 LIN28AQ9H9Z2 209 aaKnown RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 HCFC1R1Q9NWW0 138 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 TEX13DA0A0J9YY54 714 aaPredicted RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 OR2L2Q8NH16 312 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 OR51A7Q8NH64 312 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 CEP76Q8TAP6 659 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 FCRL3Q96P31 734 aaPredicted RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 LDOC1O95751 146 aaPredicted RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ASGR2P07307 311 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 IL3P08700 152 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 MERTKQ12866 999 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 KCNJ11Q14654 390 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 UBE2UQ5VVX9 321 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 VTCN1Q7Z7D3 282 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 ZSCAN4Q8NAM6 433 aaPredicted RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 OR51G2Q8NGK0 314 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 GEMIN6Q8WXD5 167 aaKnown RBP12.1□□□□□ -0.47
TMEM56-201ENST00000370203 RAD9AQ99638 391 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 POLE4Q9NR33 117 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 SLCO3A1Q9UIG8 710 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
TMEM56-201ENST00000370203 AGPSO00116 658 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 ELK4P28324 431 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 DNAJA1P31689 397 aaKnown RBP12.09□□□□□ -0.47
TMEM56-201ENST00000370203 HSD17B2P37059 387 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 IRF5Q13568 498 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 DEFB133Q30KQ1 61 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 MEX3DQ86XN8 651 aaKnown RBP12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TP53INP2Q8IXH6 220 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 MYLIPQ8WY64 445 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 APOBEC3BQ9UH17 382 aaKnown RBP12.09□□□□□ -0.47
TMEM56-201ENST00000370203 SIX4Q9UIU6 781 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 PIM1P11309 404 aaPredicted RBP12.09□□□□□ -0.47
TMEM56-201ENST00000370203 PEPDP12955 493 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 SNTA1Q13424 505 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 SERINC3Q13530 473 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TGFBIQ15582 683 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TMEM236Q5W0B7 351 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 XKRXQ6PP77 449 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 OR10T2Q8NGX3 314 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 EFCAB11Q9BUY7 163 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 C1orf21Q9H246 121 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 USP29Q9HBJ7 922 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 SARDHQ9UL12 918 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 LOC100130705A0A1B0GUX0 176 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 C2orf74A8MZ97 194 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 RAD1O60671 282 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 AHSA1O95433 338 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 SLC18A1P54219 525 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 PRMT2P55345 433 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 GPR17Q13304 367 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TYSND1Q2T9J0 566 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 WSCD2Q2TBF2 565 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TSPAN33Q86UF1 283 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 CD180Q99467 661 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 ZNF471Q9BX82 626 aaPredicted RBP12.09□□□□□ -0.47
TMEM56-201ENST00000370203 ST6GALNAC4Q9H4F1 302 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 KAT8Q9H7Z6 458 aaKnown RBP12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TPT1P8Q9HAU6 139 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 ACOX3O15254 700 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 XPNPEP2O43895 674 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
TMEM56-201ENST00000370203 WDR45Q9Y484 360 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 PCDHGB7Q9Y5F8 929 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 FAM171A2A8MVW0 826 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 HTR1AP08908 422 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TUBG1P23258 451 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 OR4D2P58180 307 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 PTP4A2Q12974 167 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 TMEM110Q86TL2 294 aa12.09□□□□□ -0.47
TMEM56-201ENST00000370203 DCBLD2Q96PD2 775 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms