RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 BRF2Q9HAW0 419 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 PRDM7Q9NQW5 492 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 THAP1Q9NVV9 213 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 DKK4Q9UBT3 224 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 RAXQ9Y2V3 346 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 RAP2CQ9Y3L5 183 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 H0YIG0 161 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 PLPP1O14494 284 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 CHST10O43529 356 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 B3GALT2O43825 422 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 GBAP04062 536 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 CAPNS1P04632 268 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 KITP10721 976 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 F8A1P23610 371 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 CERS1P27544 350 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 RPL14P50914 215 aaKnown RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 MTTPP55157 894 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 RPS18P62269 152 aaKnown RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 SKP1P63208 163 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 CSTF3Q12996 717 aaKnown RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 DNASE1L3Q13609 305 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 CUL3Q13618 768 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 RUNX2Q13950 521 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 ERV3-1Q14264 604 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 PDCD2Q16342 344 aaPredicted RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 UGT3A2Q3SY77 523 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 C10orf62Q5T681 223 aaPredicted RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 ZNF793Q6ZN11 406 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 OVCH1Q7RTY7 1134 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 TMEM151BQ8IW70 566 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 ENDOVQ8N8Q3 282 aaKnown RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 OR51Q1Q8NH59 317 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 RAB3IL1Q8TBN0 382 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 CKAP2Q8WWK9 683 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 KIAA1143Q96AT1 154 aaPredicted RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 PEX11GQ96HA9 241 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 QRFPRQ96P65 431 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 KCNC2Q96PR1 638 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 TBCDQ9BTW9 1192 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 RBCK1Q9BYM8 510 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 TUBB1Q9H4B7 451 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 VPS29Q9UBQ0 182 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 CTSFQ9UBX1 484 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 MARCOQ9UEW3 520 aaPredicted RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 DNAJC15Q9Y5T4 150 aa13.16□□□□□ -0.3
TPM3-211ENST00000368531 MRPS18BQ9Y676 258 aaKnown RBP13.16□□□□□ -0.3
TPM3-211ENST00000368531 SEC16AO15027 2179 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 A0A088AWK7 358 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 TAF4O00268 1085 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 PIP5K1BO14986 540 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 SNNO75324 88 aaPredicted RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 EEDO75530 441 aaKnown RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 KLK1P06870 262 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 HSD3B1P14060 373 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 LIFP15018 202 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 ZNF10P21506 573 aaPredicted RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 HSD3B2P26439 372 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 EIF2S3P41091 472 aaKnown RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 RPS15P62841 145 aaKnown RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 OCA2Q04671 838 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 SLAMF1Q13291 335 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 DSG2Q14126 1118 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 NCF4Q15080 339 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 VWA2Q5GFL6 755 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 MFSD4BQ5TF39 518 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 ZNF517Q6ZMY9 492 aaPredicted RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 GBP7Q8N8V2 638 aaPredicted RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 ACOT4Q8N9L9 421 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 APIPQ96GX9 242 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 MAGEB18Q96M61 343 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 SERINC2Q96SA4 455 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 SOX17Q9H6I2 414 aaPredicted RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 SLCO1B3Q9NPD5 702 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 PSD3Q9NYI0 1048 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 AHSPQ9NZD4 102 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 ZNF282Q9UDV7 671 aaPredicted RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 IL17BQ9UHF5 180 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 FBXW2Q9UKT8 454 aa13.15□□□□□ -0.3
TPM3-211ENST00000368531 FARSAQ9Y285 508 aaKnown RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 PTRH2Q9Y3E5 179 aaKnown RBP13.15□□□□□ -0.3
TPM3-211ENST00000368531 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 FAM227AF5H4B4 570 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 SLC28A1O00337 649 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 KLF11O14901 512 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 RRP8O43159 456 aaKnown RBP13.14□□□□□ -0.31
TPM3-211ENST00000368531 CNOT3O75175 753 aaKnown RBP13.14□□□□□ -0.31
TPM3-211ENST00000368531 JRKO75564 520 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 SEMA3DO95025 777 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 HIST1H1TP22492 207 aaPredicted RBP13.14□□□□□ -0.31
TPM3-211ENST00000368531 BSGP35613 385 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 XCR1P46094 333 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 OCRLQ01968 901 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms