RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 FOXE1O00358 373 aaPredicted RBP17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 EFCAB14O75071 495 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 IL3P08700 152 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 C6P13671 934 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 E2F2Q14209 437 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 GANABQ14697 944 aaKnown RBP17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 IFI44LQ53G44 452 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 PRSS36Q5K4E3 855 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 FAM83HQ6ZRV2 1179 aaPredicted RBP17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 CCDC103Q8IW40 242 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 LAS2Q8IYD9 372 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 OR52N2Q8NGI0 321 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 LGALS12Q96DT0 336 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 PALMDQ9NP74 551 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 NECTIN3Q9NQS3 549 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 RHCGQ9UBD6 479 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 RAB23Q9ULC3 237 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 MAPRE3Q9UPY8 281 aa17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 CFAP20Q9Y6A4 193 aaKnown RBP17.33■□□□□ 0.36
UBQLN4-201ENST00000368309 FUOMA2VDF0 154 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 ADAMDEC1O15204 470 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 GPR37L1O60883 481 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 CTNNB1P35222 781 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 DGKEP52429 567 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 CDK6Q00534 326 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 SLC6A16Q9GZN6 736 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 CCNB1IP1Q9NPC3 277 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 CCDC177Q9NQR7 707 aaPredicted RBP17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 A0A1W2PRB8 838 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 RTCAO00442 366 aaKnown RBP17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 PNLIPRP1P54315 467 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 CYP4F2P78329 520 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 ZNF846Q147U1 533 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 FNDC3BQ53EP0 1204 aaKnown RBP17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 FAM71E1Q6IPT2 247 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 LGI4Q8N135 537 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 GABARAPL3Q9BY60 117 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 TAS2R9Q9NYW1 312 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 SLC6A14Q9UN76 642 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 IRAK3Q9Y616 596 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 PRAMEF33A0A0G2JMD5 474 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 PRAMEF10O60809 474 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 RPS26P62854 115 aaKnown RBP17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 LRRC56Q8IYG6 542 aaPredicted RBP17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 OR5AR1Q8NGP9 310 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 GOT1L1Q8NHS2 421 aaPredicted RBP17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 RSPRY1Q96DX4 576 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 CRISPLD2Q9H0B8 497 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 HMG20AQ9NP66 347 aa17.32■□□□□ 0.36
UBQLN4-201ENST00000368309 OR2A25A4D2G3 310 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 PCDH17O14917 1159 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 FGF19O95750 216 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 SRPRAP08240 638 aaKnown RBP17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 LIPAP38571 399 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 SLC19A1P41440 591 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 MAPK9P45984 424 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 DGUOKQ16854 277 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 SLC44A2Q8IWA5 706 aaPredicted RBP17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 GTPBP3Q969Y2 492 aaKnown RBP17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 OTOL1A6NHN0 477 aaPredicted RBP17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 PRNPP04156 253 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 DYNC2LI1Q8TCX1 351 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 IPCEF1Q8WWN9 437 aaPredicted RBP17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 CXorf40BQ96DE9 158 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 ZDHHC5Q9C0B5 715 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 EHD1Q9H4M9 534 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 EPHX3Q9H6B9 360 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 AKIP1Q9NQ31 210 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 MIEF1Q9NQG6 463 aa17.31■□□□□ 0.36
UBQLN4-201ENST00000368309 DPM1O60762 260 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 GGT2P36268 569 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 BCL7AQ4VC05 210 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 TRIM40Q6P9F5 258 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 TMIGD1Q6UXZ0 262 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 VN1R5Q7Z5H4 357 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 EGFL6Q8IUX8 553 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 NLGN4XQ8N0W4 816 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 METTL4Q8N3J2 472 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 OTUB2Q96DC9 234 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 ZCCHC2Q9C0B9 1178 aaKnown RBP17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 GPR83Q9NYM4 423 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 INSL6Q9Y581 213 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 HTRA4P83105 476 aaPredicted RBP17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 IFITM3Q01628 133 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 INAQ16352 499 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 MICAQ29983 383 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 C9orf64Q5T6V5 341 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 PAGE2Q7Z2X7 111 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 CACUL1Q86Y37 369 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 FBXO15Q8NCQ5 510 aaPredicted RBP17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 PPP1R14BQ96C90 147 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 WDR34Q96EX3 536 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 ABCG4Q9H172 646 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 SAGE1Q9NXZ1 904 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 DAPK2Q9UIK4 370 aa17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 HELZP42694 1942 aaKnown RBP17.3■□□□□ 0.36
UBQLN4-201ENST00000368309 PSMD11O00231 422 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms