RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CYP24A1Q07973 514 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR1M1Q8NGA1 313 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ASB17Q8WXJ9 295 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 UHRF1Q96T88 793 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CAPN10Q9HC96 672 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CXXC1Q9P0U4 656 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RABAC1Q9UI14 185 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TLR4O00206 839 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 COL2A1P02458 1487 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CXCR1P25024 350 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CLCN4P51793 760 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ACOT6Q3I5F7 207 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FIGNL1Q6PIW4 674 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 METTL7BQ6UX53 244 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SPATA31D1Q6ZQQ2 1576 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 BRINP2Q9C0B6 783 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GPRC5CQ9NQ84 441 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FGBP02675 491 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CARD16Q5EG05 197 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ALKBH2Q6NS38 261 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KIAA0319LQ8IZA0 1049 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF567Q8N184 647 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PRELID2Q8N945 189 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MUL1Q969V5 352 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 BOLA2-SMG1P6H3BVE0 249 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PGAM2P15259 253 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ANXA7P20073 488 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PGGT1BP53609 377 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GPR180Q86V85 440 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OR52K1Q8NGK4 314 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 AGAP2Q99490 1192 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SHARPINQ9H0F6 387 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PORCNQ9H237 461 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DTLQ9NZJ0 730 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CDRT1O95170 752 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MLLT10P55197 1068 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GPR176Q14439 515 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PEA15Q15121 130 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 BCL2A1Q16548 175 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 C9orf135Q5VTT2 229 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RAB39BQ96DA2 213 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DIRAS2Q96HU8 199 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SYT17Q9BSW7 474 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 STK25O00506 426 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SNNO75324 88 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 BEST1O76090 585 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CHATP28329 748 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF177Q13360 481 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TAF1AQ15573 450 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KCNIP4Q6PIL6 250 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SMARCD3Q6STE5 483 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 B3GLCTQ6Y288 498 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 EPHX4Q8IUS5 362 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MTMR8Q96EF0 704 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TCAF1Q9Y4C2 921 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 NTF3P20783 257 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM200AQ86VY9 491 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MRPL22Q9NWU5 206 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KIAA1522Q9P206 1035 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GMPPBQ9Y5P6 360 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OR7A10O76100 309 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CYP11A1P05108 521 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 STSP08842 583 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CT45A8P0DMV1 189 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CT45A9P0DMV2 189 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CT45A2Q5DJT8 189 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GDPD4Q6W3E5 623 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OOSP2Q86WS3 158 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OR56A1Q8NGH5 318 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GPRC5BQ9NZH0 403 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PCDHA2Q9Y5H9 948 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SPIN1Q9Y657 262 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KPTNQ9Y664 436 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 LRRC14BA6NHZ5 514 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PEX10O60683 326 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 HLA-DRAP01903 254 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 LTFP02788 710 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RD3LP0DJH9 198 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CTBP1Q13363 440 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CERKLQ49MI3 558 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KIAA0895LQ68EN5 471 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 LETMD1Q6P1Q0 360 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 METTL6Q8TCB7 284 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MBOAT7Q96N66 472 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TSGA13Q96PP4 275 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RBAKQ9NYW8 714 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 WWOXQ9NZC7 414 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DEPDC5O75140 1603 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PAK4O96013 591 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OPN1MWP04001 364 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CTXN2P0C2S0 81 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OPN1MW2P0DN77 364 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OPN1MW3P0DN78 364 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SNRPGP62308 76 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PTCHD4Q6ZW05 846 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SERPINA12Q8IW75 414 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CMIPQ8IY22 773 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KDM8Q8N371 416 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms