RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CHRNA6Q15825 494 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 DECR1Q16698 335 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 LPCAT4Q643R3 524 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 RHBDF2Q6PJF5 856 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 USP43Q70EL4 1123 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 COX15Q7KZN9 410 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CILP2Q8IUL8 1156 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 INO80EQ8NBZ0 244 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 DNAJB14Q8TBM8 379 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 THAP3Q8WTV1 239 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ACOT12Q8WYK0 555 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 HMCESQ96FZ2 354 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CGREF1Q99674 301 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ACO2Q99798 780 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SLC30A2Q9BRI3 323 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 LGR4Q9BXB1 951 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CDH20Q9HBT6 801 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CKLFQ9UBR5 152 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 TGM5O43548 720 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 SOX30O94993 753 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 VAPBO95292 243 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 GLDCP23378 1020 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 FOXK2Q01167 660 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 SLC10A7Q0GE19 358 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 RALGPS1Q5JS13 557 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TMEM201Q5SNT2 666 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 RSPO2Q6UXX9 243 aaPredicted RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TRIB2Q92519 343 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 MBOAT7Q96N66 472 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 LRFN5Q96NI6 719 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 NXF3Q9H4D5 531 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 KAT8Q9H7Z6 458 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 MAB21L2Q9Y586 359 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 A0A1W2PPH5 198 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 C5orf60A6NFR6 353 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 RNGTTO60942 597 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 OR2B3O76000 313 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 RSL1D1O76021 490 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CPNE6O95741 557 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 SCGB1D2O95969 90 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CRYABP02511 175 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 FMO4P31512 558 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 GPR17Q13304 367 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 MAD2L1BPQ15013 274 aaPredicted RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF600Q6ZNG1 722 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ADGRA1Q86SQ6 560 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 MAP4K3Q8IVH8 894 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 OR2T34Q8NGX1 318 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ZCCHC10Q8TBK6 192 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CIB1Q99828 191 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CHIAQ9BZP6 476 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 THUMPD1Q9NXG2 353 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TVP23AA6NH52 213 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ZMPSTE24O75844 475 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ACTL6BO94805 426 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CTSKP43235 329 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF84P51523 738 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ATP6V0D1P61421 351 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TMEM211Q6ICI0 200 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 GCNT7Q6ZNI0 430 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ERN2Q76MJ5 926 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 PXKQ7Z7A4 578 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 EID2Q8N6I1 236 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 GSTCDQ8NEC7 633 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TANKQ92844 425 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 LRCH3Q96II8 777 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 SUSD3Q96L08 255 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 PCYT2Q99447 389 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TAS2R3Q9NYW6 316 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 MAGEL2Q9UJ55 1249 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 NXT1Q9UKK6 140 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ACSL6Q9UKU0 697 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 GABRR3A8MPY1 467 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 HDAC3O15379 428 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 FLRT2O43155 660 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 RGS9O75916 674 aaPredicted RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 EDN1P05305 212 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 HNRNPA2B1P22626 353 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CD38P28907 300 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ERP29P30040 261 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 SLC6A4P31645 630 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 SLC11A1P49279 550 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CRADDP78560 199 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TAP2Q03519 686 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 GJB7Q6PEY0 223 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TMEM220Q6QAJ8 160 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 C17orf99Q6UX52 265 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 USP51Q70EK9 711 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 CPEB3Q8NE35 698 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TAAR8Q969N4 342 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 RCN3Q96D15 328 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TRMT61AQ96FX7 289 aaKnown RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 MIPEPQ99797 713 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 AMBRA1Q9C0C7 1298 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 DNAJC18Q9H819 358 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 ANKRA2Q9H9E1 313 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 IFT46Q9NQC8 304 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 PAK6Q9NQU5 681 aaPredicted RBP8.35□□□□□ -1.07
SYNE1-206ENST00000367253 TAS2R7Q9NYW3 318 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 SLC22A14Q9Y267 594 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms