RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 GALNT15Q8N3T1 639 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 HSPBAP1Q96EW2 488 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM80Q96HE8 168 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 TGM7Q96PF1 710 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 TSGA13Q96PP4 275 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 TREM1Q9NP99 234 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 FXYD6-FXYD2A0A087WZ82 144 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 EI24O14681 340 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 PIGRP01833 764 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 CBLP22681 906 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 UQCRC2P22695 453 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 GSTM2P28161 218 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 HSD11B2P80365 405 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 ZC3H14Q6PJT7 736 aaKnown RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 HSH2DQ96JZ2 352 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 GPR174Q9BXC1 333 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 FXYD6Q9H0Q3 95 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 EXOSC1Q9Y3B2 195 aaKnown RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 MSX1P28360 303 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 BNIP3Q12983 259 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 RAET1LQ5VY80 246 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 DUS1LQ6P1R4 473 aaKnown RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 KCTD9Q7L273 389 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 FTMTQ8N4E7 242 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 PYURFQ96I23 114 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 C17orf62Q9BQA9 187 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 B4GALT6Q9UBX8 382 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 APBB3O95704 486 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 IFNA2P01563 188 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 KCNE1P15382 129 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 FUT4P22083 530 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 DNAJB1P25685 340 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 TMED4Q7Z7H5 227 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 DMRTB1Q96MA1 342 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 CD244Q9BZW8 370 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 C8orf33Q9H7E9 229 aaPredicted RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 NLE1Q9NVX2 485 aaPredicted RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 H3BSH0 61 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 KCNJ13O60928 360 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 PRKD3O94806 890 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 C8BP07358 591 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 CFL1P23528 166 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 RBMXP38159 391 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 GJA8P48165 433 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 SERINC3Q13530 473 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 GBX1Q14549 363 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 LASP1Q14847 261 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 LIN52Q52LA3 116 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 ZC3HC1Q86WB0 502 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 SNX29P2Q8IUI4 249 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 SCGB1C1Q8TD33 95 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 RBCK1Q9BYM8 510 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 TUBA8Q9NY65 449 aaPredicted RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 CA14Q9ULX7 337 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 POMPQ9Y244 141 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 OR6C74A6NCV1 312 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 M0QX08 132 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 PRAMEF11O60813 436 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 CPNE6O95741 557 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 NR0B1P51843 470 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 TSTQ16762 297 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 LACTB2Q53H82 288 aaPredicted RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 CARD17Q5XLA6 110 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 KCTD18Q6PI47 426 aaPredicted RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM110Q86TL2 294 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM203Q969S6 136 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 NEDD4LQ96PU5 975 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 RARRES3Q9UL19 164 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 WNT7AO00755 349 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 GPR37L1O60883 481 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 IFNA7P01567 189 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 MAN2A2P49641 1150 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 MVKQ03426 396 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM35AQ53FP2 167 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 C10orf62Q5T681 223 aaPredicted RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 ZNF783Q6ZMS7 281 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 RNF130Q86XS8 419 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.16■□□□□ 0.023e-13■■■■□ 25.3
NUCKS1-201ENST00000367142 FUZQ9BT04 418 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 MRM3Q9HC36 420 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 SH2B3Q9UQQ2 575 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 DFNA5O60443 496 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 E2F1Q01094 437 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 DLX2Q07687 328 aaPredicted RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 ZNF763Q0D2J5 394 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 SH3D19Q5HYK7 790 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 SUSD1Q6UWL2 747 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 BOLLQ8N9W6 283 aaKnown RBP15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 STON2Q8WXE9 905 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 NECTIN4Q96NY8 510 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 TPT1P8Q9HAU6 139 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 DKK3Q9UBP4 350 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 CDH10Q9Y6N8 788 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 PLIN4Q96Q06 1357 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 C11orf98E9PRG8 122 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 GSRP00390 522 aa15.16■□□□□ 0.02
NUCKS1-201ENST00000367142 PET100P0DJ07 73 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms