RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TVP23BQ9NYZ1 205 aa7.86□□□□□ -1.15
CD46-208ENST00000367042 COMMD3Q9UBI1 195 aa7.86□□□□□ -1.15
CD46-208ENST00000367042 GABRQQ9UN88 632 aa7.86□□□□□ -1.15
CD46-208ENST00000367042 CORO2BQ9UQ03 480 aa7.86□□□□□ -1.15
CD46-208ENST00000367042 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 MEIOCA2RUB1 952 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 FAM172BPA6NC97 362 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 IFNW1P05000 195 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 WEE1P30291 646 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CTSOP43234 321 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 HNMTP50135 292 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PTPN5P54829 565 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 WNT3P56703 355 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 SCN1BQ07699 218 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 HNRNPA0Q13151 305 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 VEZF1Q14119 521 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 BAK1Q16611 211 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CCSMST1Q4G0I0 132 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 RPS26P11Q5JNZ5 115 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 TRIM40Q6P9F5 258 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 KLHL17Q6TDP4 642 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 USP30Q70CQ3 517 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 OTOP2Q7RTS6 562 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 ZNF367Q7RTV3 350 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 C11orf96Q7Z7L8 435 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 GALNT13Q8IUC8 556 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CHCHD4Q8N4Q1 142 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 TCEANCQ8N8B7 351 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 HUS1BQ8NHY5 278 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 COQ8BQ96D53 544 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CRELD1Q96HD1 420 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 SLC12A9Q9BXP2 914 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 IRF2BPLQ9H1B7 796 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CCDC59Q9P031 241 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 ZNF282Q9UDV7 671 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 TEKT2Q9UIF3 430 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 HCN4Q9Y3Q4 1203 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 TLR4O00206 839 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 FZD6O60353 706 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 VNN2O95498 520 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 GASTP01350 101 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 ATP1B2P14415 290 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 PPIBP23284 216 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 SNRPD2P62316 118 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 FKBP1BP68106 108 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 C22orf42Q6IC83 251 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 AGTRAPQ6RW13 159 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PAQR6Q6TCH4 344 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CADM2Q8N3J6 435 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 SYNPOQ8N3V7 929 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 LILRA3Q8N6C8 439 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 IQCF1Q8N6M8 205 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 C19orf18Q8NEA5 215 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 DENND6BQ8NEG7 585 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 OR6F1Q8NGZ6 308 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 UBTD2Q8WUN7 234 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 ASZ1Q8WWH4 475 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CLEC4EQ9ULY5 219 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 TMEM98Q9Y2Y6 226 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PRAMEF33A0A0G2JMD5 474 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 HOXC11O43248 304 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 ARHGEF9O43307 516 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 MRPS14O60783 128 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 PRAMEF10O60809 474 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 IFNA14P01570 189 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 GSTM1P09488 218 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PSKH1P11801 424 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PRKAR2AP13861 404 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 GJA1P17302 382 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CD22P20273 847 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CHMP24386 653 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 IL12RB1P42701 662 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 RECQLP46063 649 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 ASMTP46597 345 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 CAV3P56539 151 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 TAS2R50P59544 299 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 TARDBPQ13148 414 aaKnown RBP eCLIP7.85□□□□□ -1.15
CD46-208ENST00000367042 NFE2L1Q14494 772 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 SPHARQ15513 63 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 GPR162Q16538 588 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 TRIQKQ629K1 86 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 ERAP2Q6P179 960 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PAMR1Q6UXH9 720 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 MEX3DQ86XN8 651 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 PLPP6Q8IY26 295 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 ASB11Q8WXH4 323 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 LINC01599Q8WXQ3 324 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 RAB8BQ92930 207 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 OTUB1Q96FW1 271 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 FOPNLQ96NB1 174 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 GABARAPL3Q9BY60 117 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 NMNAT1Q9HAN9 279 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 LSM7Q9UK45 103 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 SNX7Q9UNH6 387 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PCDHGA2Q9Y5H1 932 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 SPIN1Q9Y657 262 aaPredicted RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 CFAP20Q9Y6A4 193 aaKnown RBP7.85□□□□□ -1.15
CD46-208ENST00000367042 CLCA3PQ9Y6N3 262 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 PTPRDP23468 1912 aa7.85□□□□□ -1.15
CD46-208ENST00000367042 TMEM202A6NGA9 273 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms