RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MRI1Q9BV20 369 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 MTMR10Q9NXD2 777 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 BNIP3Q12983 259 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RPA4Q13156 261 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 PRSS48Q7RTY5 328 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RASGEF1AQ8N9B8 481 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 DPEP2Q9H4A9 486 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 C19orf25Q9UFG5 118 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RPL17P18621 184 aaKnown RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 INHBCP55103 352 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 VMACQ2NL98 169 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RNF130Q86XS8 419 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 PROKR2Q8NFJ6 384 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ADAP2Q9NPF8 381 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 STUB1Q9UNE7 303 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RNF11Q9Y3C5 154 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 EOGTQ5NDL2 527 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 CBARPQ8N350 705 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 PYCR2Q96C36 320 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 CMAHPQ9Y471 501 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 TGFB1P01137 390 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ITGB1P05556 798 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 MXD1Q05195 221 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF689Q96CS4 500 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 PTTG1O95997 202 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 YAP1P46937 504 aaKnown RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 TSPAN5P62079 268 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RPS21P63220 83 aaKnown RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 Q6ZVU0 165 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 IQCHQ86VS3 1027 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 C1orf216Q8TAB5 229 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 CARS2Q9HA77 564 aaKnown RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 H3BUI4 141 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 M0QZQ0 153 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ALPIP09923 528 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ACTR1AP61163 376 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 SEC23BQ15437 767 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC44A3Q8N4M1 653 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 GNPDA2Q8TDQ7 276 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 SHDQ96IW2 340 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 CITED4Q96RK1 184 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RMI1Q9H9A7 625 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 LRP5O75197 1615 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 FAM170BA6NMN3 283 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 LRRTM2O43300 516 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF821O75541 412 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 CHRNA1P02708 482 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF20P17024 532 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ST3GAL4Q11206 333 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC9B2Q86UD5 537 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 FANCGO15287 622 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 CD9P21926 228 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 TAC3Q9UHF0 121 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 FSHRP23945 695 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 SOX9P48436 509 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF234Q14588 700 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 TIGD4Q8IY51 512 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZCCHC10Q8TBK6 192 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 GPR89AB7ZAQ6 455 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 LRRN3E7EW58 273 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 GPR32O75388 356 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 GPR89BP0CG08 455 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 BCKDHAP12694 445 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 MATN1P21941 496 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR3A3P47888 321 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR3A2P47893 321 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 PLEKHN1Q494U1 663 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 OTOP2Q7RTS6 562 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZFP3Q96NJ6 502 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 HIST1H2AAQ96QV6 131 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 LRRN3Q9H3W5 708 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 HSFX1Q9UBD0 423 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 MAGEA8P43361 318 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 NPRL3Q12980 569 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 FAM214AQ32MH5 1076 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 LRIF1Q5T3J3 769 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 RANBP10Q6VN20 620 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 FAM124AQ86V42 546 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 CHST4Q8NCG5 386 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 FCRL3Q96P31 734 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 WDR6Q9NNW5 1121 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC2A4RGQ9NR83 387 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZDHHC7Q9NXF8 308 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 FBXO9Q9UK97 447 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 PPIEQ9UNP9 301 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 MID1O15344 667 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 RAB39AQ14964 217 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 CLDN19Q8N6F1 224 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 IGSF21Q96ID5 467 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR2B2Q9GZK3 357 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 C9J4A7 227 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 ALAS2P22557 587 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 NRLP54845 237 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 KCNAB2Q13303 367 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms