RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 NFKBIDQ8NI38 313 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 CHPT1Q8WUD6 406 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF707Q96C28 371 aaPredicted RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 RSPRY1Q96DX4 576 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 FEVQ99581 238 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 RAD9AQ99638 391 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 OR52A5Q9H2C5 316 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 CXXC1Q9P0U4 656 aaPredicted RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 ACSL6Q9UKU0 697 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 RNF6Q9Y252 685 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 MKI67P46013 3256 aaKnown RBP21.18■□□□□ 0.98
UPF3A-201ENST00000351487 LZTS3O60299 673 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-201ENST00000351487 MMP20O60882 483 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 POU2F2P09086 479 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 ANXA8P13928 327 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 PSMB9P28065 219 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 SLC5A12Q1EHB4 618 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 TMEM52BQ4KMG9 183 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 MLIPQ5VWP3 458 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 GPR153Q6NV75 609 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 VN1R5Q7Z5H4 357 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF554Q86TJ5 538 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 OR10G2Q8NGC3 310 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 ERGIC3Q9Y282 383 aa21.18■□□□□ 0.98
UPF3A-201ENST00000351487 OR2A25A4D2G3 310 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 CLDN25C9JDP6 229 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 FGBP02675 491 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 RB1P06400 928 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 KLK1P06870 262 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 ITGA2P17301 1181 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 PRIM2P49643 509 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 PCBP3P57721 371 aaKnown RBP21.17■□□□□ 0.98
UPF3A-201ENST00000351487 CDK6Q00534 326 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 OCA2Q04671 838 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 PRSS53Q2L4Q9 553 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 UBE2UQ5VVX9 321 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 TMIGD1Q6UXZ0 262 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 AHSA2Q719I0 299 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 ERN2Q76MJ5 926 aaKnown RBP21.17■□□□□ 0.98
UPF3A-201ENST00000351487 FAM129CQ86XR2 697 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF740Q8NDX6 193 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 DNASE1L2Q92874 299 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 PPP1R16AQ96I34 528 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 PLCXD1Q9NUJ7 323 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 SPASTQ9UBP0 616 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 ICKQ9UPZ9 632 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 POFUT2Q9Y2G5 429 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF451Q9Y4E5 1061 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 PRAMEF25A6NGN4 478 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 SULT1C4O75897 302 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 ARAFP10398 606 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 TNFRSF1BP20333 461 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 GJA8P48165 433 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 CASP9P55211 416 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 HTRA3P83110 453 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 UBE3AQ05086 875 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF846Q147U1 533 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 FAM83HQ6ZRV2 1179 aaPredicted RBP21.17■□□□□ 0.98
UPF3A-201ENST00000351487 SLCO6A1Q86UG4 719 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 PDZD3Q86UT5 571 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 IGFN1Q86VF2 1251 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 RNF130Q86XS8 419 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 SLC5A8Q8N695 610 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 GEMIN6Q8WXD5 167 aaKnown RBP21.17■□□□□ 0.98
UPF3A-201ENST00000351487 FCGR1BQ92637 280 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 RAD51AP1Q96B01 352 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 KCNC2Q96PR1 638 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 AKIP1Q9NQ31 210 aa21.17■□□□□ 0.98
UPF3A-201ENST00000351487 A0A1W2PRB8 838 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 KRT75O95678 551 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 IFNA14P01570 189 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 IL3P08700 152 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 IDUAP35475 653 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 CHI3L1P36222 383 aaPredicted RBP21.16■□□□□ 0.98
UPF3A-201ENST00000351487 TEKQ02763 1124 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 EIF4HQ15056 248 aaKnown RBP21.16■□□□□ 0.98
UPF3A-201ENST00000351487 MICAQ29983 383 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 GAB4Q2WGN9 574 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 IER5LQ5T953 404 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 P3H2Q8IVL5 708 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 NDNFQ8TB73 568 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 FAM129BQ96TA1 746 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 WDR12Q9GZL7 423 aaKnown RBP21.16■□□□□ 0.98
UPF3A-201ENST00000351487 HMG20AQ9NP66 347 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 ASF1AQ9Y294 204 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 PLK4O00444 970 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 ERGP11308 486 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 SPIBQ01892 262 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 RPA4Q13156 261 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 CAMK1Q14012 370 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 DGCR6Q14129 220 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 SLC9B2Q86UD5 537 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 DCUN1D3Q8IWE4 304 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 SLC30A8Q8IWU4 369 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 KRT78Q8N1N4 520 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 CENPSQ8N2Z9 138 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 PSD2Q9BQI7 771 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 EPS8L2Q9H6S3 715 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 PCDHGA2Q9Y5H1 932 aa21.16■□□□□ 0.98
UPF3A-201ENST00000351487 M0R3G1 203 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms