RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 PREBQ9HCU5 417 aa22.1■■□□□ 1.13
CLPTM1-201ENST00000337392 NDUFA13Q9P0J0 144 aa22.1■■□□□ 1.13
CLPTM1-201ENST00000337392 SAMHD1Q9Y3Z3 626 aaKnown RBP22.1■■□□□ 1.13
CLPTM1-201ENST00000337392 TESMINQ9Y4I5 508 aa22.1■■□□□ 1.13
CLPTM1-201ENST00000337392 IGKV1-8A0A0C4DH67 115 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 PRAMEF25A6NGN4 478 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 C7P10643 843 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 PCDH1Q08174 1060 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 SMN1Q16637 294 aaKnown RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 ITPRIPL2Q3MIP1 535 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 CCNYL2Q5T2Q4 361 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 THAP5Q7Z6K1 395 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 METTL4Q8N3J2 472 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 CHDHQ8NE62 594 aaPredicted RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 BPIFB6Q8NFQ5 453 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 OR52E4Q8NGH9 312 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 TRMT61BQ9BVS5 477 aaKnown RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 FANCEQ9HB96 536 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 MIEF1Q9NQG6 463 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 PAK1IP1Q9NWT1 392 aaPredicted RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 TEX10Q9NXF1 929 aaPredicted RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 DENND4AQ7Z401 1863 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 H0YAE9 185 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 FOXE1O00358 373 aaPredicted RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 OR1F1O43749 312 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 HTR1AP08908 422 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 ALPPL2P10696 532 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 IGFBP5P24593 272 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 ANKRD54Q6NXT1 300 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 CBLL1Q75N03 491 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 RD3Q7Z3Z2 195 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 FRMD1Q8N878 549 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 TP53I13Q8NBR0 393 aaPredicted RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 ISOC1Q96CN7 298 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 SLX1AQ9BQ83 275 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 YIPF2Q9BWQ6 316 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 LHX9Q9NQ69 397 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 PTTG2Q9NZH5 202 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 SCHIP1Q9P0W5 487 aaPredicted RBP22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 BTNL2Q9UIR0 455 aa22.09■■□□□ 1.13
CLPTM1-201ENST00000337392 TICRRQ7Z2Z1 1910 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3DA0A087WVF3 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3IA0A087WXS9 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3EA0A087X179 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3KA0A087X1G2 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3FA6NER0 549 aaPredicted RBP22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3LB9A6J9 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 EML2O95834 649 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3HP0C7X1 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 FMO3P31513 532 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TUBA4AP68366 448 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 KCNJ10P78508 379 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 RPS26P11Q5JNZ5 115 aaPredicted RBP22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3GQ6DHY5 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3CQ6IPX1 549 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 MSANTD1Q6ZTZ1 278 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 SLC9B2Q86UD5 537 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 TBC1D3Q8IZP1 549 aaPredicted RBP22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 MAGIXQ9H6Y5 334 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 CXorf21Q9HAI6 301 aa22.08■■□□□ 1.13
CLPTM1-201ENST00000337392 POM121BA6NF01 834 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 ANKDD1BA6NHY2 528 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 RNASET2O00584 256 aaKnown RBP22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 NME6O75414 186 aaPredicted RBP22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 CHI3L1P36222 383 aaPredicted RBP22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 MAP7Q14244 749 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 TNFAIP8L2Q6P589 184 aaPredicted RBP22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 UNC5DQ6UXZ4 953 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 HORMAD1Q86X24 394 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 RAB7BQ96AH8 199 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 C12orf43Q96C57 262 aaKnown RBP22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 CXorf36Q9H7Y0 433 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 CLEC1BQ9P126 229 aa22.08■■□□□ 1.12
CLPTM1-201ENST00000337392 TRIM64A6NGJ6 449 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 PDZK1P1A8MUH7 402 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 TMPRSS11DO60235 418 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 ADAM23O75077 832 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 TRMUO75648 421 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 ATE1O95260 518 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 MATN1P21941 496 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 IGFALSP35858 605 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 HSPB3Q12988 150 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 IQCCQ4KMZ1 466 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 ZNF555Q8NEP9 628 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 EXOSC8Q96B26 276 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 TEX101Q9BY14 249 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 AICDAQ9GZX7 198 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 MDC1Q14676 2089 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 A0A1W2PRB8 838 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 SEMG1P04279 462 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 CRHBPP24387 322 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 SNRPNP63162 240 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 IL5RAQ01344 420 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 TPRG1LQ5T0D9 272 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 LCTLQ6UWM7 567 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 EIF3MQ7L2H7 374 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 SVOPLQ8N434 492 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 PJA1Q8NG27 643 aa22.07■■□□□ 1.12
CLPTM1-201ENST00000337392 CCL4L1Q8NHW4 92 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms