RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ITM2CQ9NQX7 267 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TESMINQ9Y4I5 508 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 CKAP5Q14008 2032 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 IGKV1-8A0A0C4DH67 115 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 C4orf51C9J302 202 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 KMOO15229 486 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TMPRSS11DO60235 418 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ERAL1O75616 437 aaKnown RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 HOXB9P17482 250 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 RNF144AP50876 292 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 CRYBA2P53672 197 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 SRSF11Q05519 484 aaKnown RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 LRRC74AQ0VAA2 488 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 CLPPQ16740 277 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 PAGE2BQ5JRK9 111 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 C11orf24Q96F05 449 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 PYURFQ96I23 114 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ZNF514Q96K75 400 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 CAMK1GQ96NX5 476 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 SH3GL1Q99961 368 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 APOOQ9BUR5 198 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 EFCAB11Q9BUY7 163 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 AMBRA1Q9C0C7 1298 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 DPEP2Q9H4A9 486 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 CD207Q9UJ71 328 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 MAN2B2Q9Y2E5 1009 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TICRRQ7Z2Z1 1910 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 TCRBV21S2A2A0A5A6 115 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 PTGES3LE9PB15 166 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 H3BNH8 94 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 ACADMP11310 421 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 POU2F1P14859 743 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 KDELR2P33947 212 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 HSPA13P48723 471 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 MAPK12P53778 367 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 ABHD18Q0P651 414 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 C1orf61Q13536 156 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 DAG1Q14118 895 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 CYP2A13Q16696 494 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 RHNO1Q9BSD3 238 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 ING2Q9H160 280 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 ZNF576Q9H609 170 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 REEP4Q9H6H4 257 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 FBXW2Q9UKT8 454 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 SH3GLB1Q9Y371 365 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 PCDHB11Q9Y5F2 797 aa12.02□□□□□ -0.48
LIMK1-201ENST00000336180 FAM220BPB1ANY3 271 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 C2CD4DB7Z1M9 353 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 M0R129 80 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 ZBTB11O95625 1053 aaPredicted RBP12.02□□□□□ -0.49
LIMK1-201ENST00000336180 CELA2BP08218 269 aaPredicted RBP12.02□□□□□ -0.49
LIMK1-201ENST00000336180 THRBP10828 461 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 NDUFV2P19404 249 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 PCSK6P29122 969 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 DCTP40126 519 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 RPS21P63220 83 aaKnown RBP12.02□□□□□ -0.49
LIMK1-201ENST00000336180 TXNL4AP83876 142 aaKnown RBP12.02□□□□□ -0.49
LIMK1-201ENST00000336180 MTAPQ13126 283 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 KCNAB2Q13303 367 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 SLC36A3Q495N2 470 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 SPIN4Q56A73 249 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 INTS11Q5TA45 600 aaKnown RBP12.02□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM53Q6P2H8 277 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 NUDT18Q6ZVK8 323 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM126BQ8IUX1 230 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 OR8K5Q8NH50 307 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 SDCCAG3Q96C92 435 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 REXO5Q96IC2 774 aaKnown RBP12.02□□□□□ -0.49
LIMK1-201ENST00000336180 MRGPRX1Q96LB2 322 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 TEX101Q9BY14 249 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 ANKRD60Q9BZ19 345 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 EPHX3Q9H6B9 360 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 RUBCNLQ9H714 662 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 GORASP2Q9H8Y8 452 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 CTPS2Q9NRF8 586 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 TAAR2Q9P1P5 351 aa12.02□□□□□ -0.49
LIMK1-201ENST00000336180 ARHGEF17Q96PE2 2063 aaPredicted RBP12.02□□□□□ -0.49
LIMK1-201ENST00000336180 FAM227AF5H4B4 570 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 BTN3A3O00478 584 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 UGDHO60701 494 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 SCELO95171 688 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 ADH1BP00325 375 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 FURINP09958 794 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 UMPSP11172 480 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 FCGR1AP12314 374 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 PTNP21246 168 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 CAPGP40121 348 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 ACTR1BP42025 376 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 PRIM2P49643 509 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 ACTR1AP61163 376 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 GANABQ14697 944 aaKnown RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 RGNQ15493 299 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 RAB7BQ96AH8 199 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 LINC00615Q96LM1 132 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 AICDAQ9GZX7 198 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 CXorf36Q9H7Y0 433 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 PNPLA3Q9NST1 481 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 RAB23Q9ULC3 237 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 C17orf113A0A1B0GUU1 675 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms