RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 KRT74Q7RTS7 529 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 SNX29P2Q8IUI4 249 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 CACTIN-AS1Q8N1I8 211 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 SVOPLQ8N434 492 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 GPR150Q8NGU9 434 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 OR5K1Q8NHB7 308 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 MZB1Q8WU39 189 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 COG8Q96MW5 612 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 CNPPD1Q9BV87 410 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 YTHDF1Q9BYJ9 559 aaKnown RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 DERL2Q9GZP9 239 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 NAA50Q9GZZ1 169 aaKnown RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 PCBD2Q9H0N5 130 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 SP140LQ9H930 580 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 SNTG1Q9NSN8 517 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 GMPR2Q9P2T1 348 aaKnown RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 GPR34Q9UPC5 381 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 CCRL2O00421 344 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 PPP2R1BP30154 601 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 YPEL5P62699 121 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 CHIT1Q13231 466 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF678Q5SXM1 525 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 MZT2BQ6NZ67 158 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 TRIB3Q96RU7 358 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 POPDC3Q9HBV1 291 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 AP1G1O43747 822 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ATE1O95260 518 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 TYRP1P17643 537 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 TNNI3P19429 210 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 PAICSP22234 425 aaKnown RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 PSMA1P25786 263 aaKnown RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 MAP2K4P45985 399 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ITGA1P56199 1179 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 RPS3AP61247 264 aaKnown RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 CSNK2BP67870 215 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 NFATC4Q14934 902 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 C6orf141Q5SZD1 244 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ALG1LQ6GMV1 187 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 VN1R5Q7Z5H4 357 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 DENND6BQ8NEG7 585 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 SMPDL3AQ92484 453 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 MCCC1Q96RQ3 725 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 EHD1Q9H4M9 534 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 PCDHB3Q9Y5E6 796 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM221A6NGB7 291 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 URADA6NGE7 173 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 M0R296 226 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 KCNJ13O60928 360 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 KERAO60938 352 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 GTF2E2P29084 291 aaKnown RBP11.34□□□□□ -0.59
HDAC6-201ENST00000334136 RAB25P57735 213 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 OR4D2P58180 307 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 ARPC4P59998 168 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 GSTM4Q03013 218 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 MTAPQ13126 283 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 TYSND1Q2T9J0 566 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 SPANXN4Q5MJ08 99 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 ZUFSPQ96AP4 578 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 FUNDC2Q9BWH2 189 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 VPS4AQ9UN37 437 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 A0A1B0GTW7 788 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 BTN3A3O00478 584 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 CD27P26842 260 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 CTSCP53634 463 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 INHBCP55103 352 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 RGS1Q08116 209 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 TPRG1LQ5T0D9 272 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 DEF8Q6ZN54 512 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 FGD2Q7Z6J4 655 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 PARGQ86W56 976 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 SLC7A5P1Q8MH63 180 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM145Q8NBT3 493 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 VANGL1Q8TAA9 524 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-201ENST00000334136 C17orf50Q8WW18 174 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 QRFPRQ96P65 431 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 KCNC2Q96PR1 638 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF347Q96SE7 839 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 ADAM30Q9UKF2 790 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 CLEC4AQ9UMR7 237 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 CEP350Q5VT06 3117 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 CASKO14936 926 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 INMTO95050 263 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 DPP6P42658 865 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 CDKN2DP55273 166 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 PTGR1Q14914 329 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 RNASE12Q5GAN4 147 aaKnown RBP11.34□□□□□ -0.59
HDAC6-201ENST00000334136 TECRLQ5HYJ1 363 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 METTL25Q8N6Q8 603 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 OR9A1PQ8NGU1 263 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 RHBGQ9H310 441 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 NKIRAS2Q9NYR9 191 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 DNAJC15Q9Y5T4 150 aa11.34□□□□□ -0.59
HDAC6-201ENST00000334136 SEMA3DO95025 777 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 CLDN9O95484 217 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 OPN1SWP03999 348 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 C8BP07358 591 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms