RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SPIBQ01892 262 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 TAP2Q03519 686 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 SCARB2Q14108 478 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 HIST2H2ACQ16777 129 aaPredicted RBP12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 DGUOKQ16854 277 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 NIPAL1Q6NVV3 410 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 ZNF547Q8IVP9 402 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 OR4C15Q8NGM1 316 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 TOX2Q96NM4 488 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 ACAT2Q9BWD1 397 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 MROQ9BYG7 248 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 ZNF226Q9NYT6 803 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 TAS2R16Q9NYV7 291 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 SPASTQ9UBP0 616 aa12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 ZNF282Q9UDV7 671 aaPredicted RBP12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
TUBA1B-201ENST00000332858 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PIPSLA2A3N6 862 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 FAM227AF5H4B4 570 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 GGT2P36268 569 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 HTRA3P83110 453 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PCDH1Q08174 1060 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 E2F2Q14209 437 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PLPP4Q5VZY2 271 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 NLRP8Q86W28 1048 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 UTP15Q8TED0 518 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 C16orf78Q8WTQ4 265 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 FOPNLQ96NB1 174 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 ATP6V1HQ9UI12 483 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PSORS1C1Q9UIG5 152 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 TCF20Q9UGU0 1960 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 MTCL1Q9Y4B5 1905 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 EFCAB9A8MZ26 197 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 STSP08842 583 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 RPS26P62854 115 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 CYP4F2P78329 520 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 DOC2BQ14184 412 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 MAPK11Q15759 364 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 ZNF77Q15935 545 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 UBE2UQ5VVX9 321 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 KIAA0907Q7Z7F0 614 aaPredicted RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 SFTPA1Q8IWL2 248 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 KLHDC8AQ8IYD2 350 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 LGI4Q8N135 537 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 RHOXF1Q8NHV9 184 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 SPACA7Q96KW9 195 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 ABCG4Q9H172 646 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 FBXO8Q9NRD0 319 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 DPM1O60762 260 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 RECKO95980 971 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PCSK2P16519 638 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 GADD45AP24522 165 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 IRS1P35568 1242 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PPM1AP35813 382 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 PRIM2P49643 509 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 EEF1A2Q05639 463 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 NFE2L1Q14494 772 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 LRRC56Q8IYG6 542 aaPredicted RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 DNAJC22Q8N4W6 341 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 GTPBP3Q969Y2 492 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 ZHX1-C8orf76Q96EF9 292 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 ZDHHC4Q9NPG8 344 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 OSGIN1Q9UJX0 560 aa12.85□□□□□ -0.35
TUBA1B-201ENST00000332858 ATP6V1G1O75348 118 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 C1GALT1C1LP0DN25 315 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 NNMTP40261 264 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 RAB15P59190 212 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 TEAD4Q15561 434 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 DUSP7Q16829 419 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 TRMT11Q7Z4G4 463 aaKnown RBP12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 VN1R5Q7Z5H4 357 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 SPRED2Q7Z698 418 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 OR52N2Q8NGI0 321 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 STARD8Q92502 1023 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 PPCDCQ96CD2 204 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 ITPAQ9BY32 194 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 WDR12Q9GZL7 423 aaKnown RBP12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 SLC6A16Q9GZN6 736 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 DCSTAMPQ9H295 470 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 ACER3Q9NUN7 267 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 TRANK1O15050 2925 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 CKAP5Q14008 2032 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 RTCAO00442 366 aaKnown RBP12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 IL3P08700 152 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 MICAQ29983 383 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 INAVAQ3KP66 663 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 IFI44LQ53G44 452 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms