RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MAGEA5P43359 124 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 FNTAP49354 379 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 NR1H2P55055 460 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 SESN2P58004 480 aaPredicted RBP13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 RHAGQ02094 409 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 TPSAB1Q15661 275 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 NDUFA9Q16795 377 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 AARS2Q5JTZ9 985 aaKnown RBP13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 TSTD2Q5T7W7 516 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 NDUFAF5Q5TEU4 345 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 ARMC3Q5W041 872 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 C20orf204Q6ZNR8 217 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 PRUNE1Q86TP1 453 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 SLC22A15Q8IZD6 547 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 PLPP5Q8NEB5 264 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 TSLPQ969D9 159 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 ISL2Q96A47 359 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 RERGQ96A58 199 aaPredicted RBP13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 NAPGQ99747 312 aaPredicted RBP13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 HCN3Q9P1Z3 774 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 TCAF1Q9Y4C2 921 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 KIAA1549Q9HCM3 1950 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 A0A1W2PPV9 198 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 A8MV72 311 aaPredicted RBP13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 CASKO14936 926 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 PFDN6O15212 129 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 P2RX6O15547 441 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 NSA2O95478 260 aaKnown RBP13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 PSMA3P25788 255 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 VPS41P49754 854 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 MPP1Q00013 466 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 ITIH4Q14624 930 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 PPP1R7Q15435 360 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 TRIP13Q15645 432 aaPredicted RBP13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 DBN1Q16643 649 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 CYP1B1Q16678 543 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 FASTKD1Q53R41 847 aaKnown RBP13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 VRK3Q8IV63 474 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 FBXW8Q8N3Y1 598 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 TMEM251Q8N6I4 163 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 RUNDC3BQ96NL0 473 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 OR2A5Q96R48 311 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 TSSK1BQ9BXA7 367 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 DEFB126Q9BYW3 111 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 LDAHQ9H6V9 325 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 KCMF1Q9P0J7 381 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 SAMD15Q9P1V8 674 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
CTHRC1-201ENST00000330295 RAI1Q7Z5J4 1906 aaPredicted RBP13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 A0A0G2JMM0 328 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 A0A1W2PPB8 328 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 A0A1W2PRS3 328 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 KIR3DP1A8MWS1 328 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 MAGEB17A8MXT2 336 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 EEF1E1-BLOC1S5C9J1V9 151 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 EEF1E1O43324 174 aaKnown RBP13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 CDC123O75794 336 aaPredicted RBP13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 CELA3AP09093 270 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 PAX1P15863 534 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 PAMP19021 973 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 CMPK1P30085 196 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 GRIA1P42261 906 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 ZNF136P52737 540 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 SRSF2Q01130 221 aaKnown RBP13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 HYAL4Q2M3T9 481 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 TYSND1Q2T9J0 566 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 CASC4Q6P4E1 433 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 PRSS41Q7RTY9 318 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 PIANPQ8IYJ0 282 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 OR4L1Q8NH43 312 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 HMGCLL1Q8TB92 370 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 MCOLN3Q8TDD5 553 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 CAPZA3Q96KX2 299 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 XAB2Q9HCS7 855 aaKnown RBP13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 SPRR3Q9UBC9 169 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 RNF14Q9UBS8 474 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 PCDHGB3Q9Y5G1 929 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 SCN3AQ9NY46 2000 aa13.68□□□□□ -0.22
CTHRC1-201ENST00000330295 ATP6AP2A0A1C7CYW4 349 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 MAGEB16A2A368 324 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 CCDC162PA2VCL2 907 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 ITGA10O75578 1167 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 ATP6AP2O75787 350 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 OR56A5P0C7T3 313 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 ENDOUP21128 410 aaKnown RBP13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 TIMP3P35625 211 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 WNT3P56703 355 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 WIPI1Q5MNZ9 446 aaPredicted RBP13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 TTC27Q6P3X3 843 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 GK5Q6ZS86 529 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 KIAA0408Q6ZU52 694 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 RAB42Q8N4Z0 105 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 OTUD6BQ8N6M0 293 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 ACAT2Q9BWD1 397 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 EXO5Q9H790 373 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 JKAMPQ9P055 326 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms