RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PPA1Q15181 289 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF439Q8NDP4 499 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 AGBL3Q8NEM8 1001 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 DAZAP1Q96EP5 407 aaKnown RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ERVK-6Q9BXR3 956 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 CLDN11O75508 207 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 PRNPP04156 253 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ERCC1P07992 297 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 NMBRP28336 390 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 OR1D2P34982 312 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 MC2RQ01718 297 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 GSTM4Q03013 218 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 LRIF1Q5T3J3 769 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 FAM71AQ8IYT1 594 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 PRR18Q8N4B5 295 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 SRRDQ9UH36 339 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TGFBIQ15582 683 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TMEM151AQ8N4L1 468 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 SUMF2Q8NBJ7 301 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 SOCS4Q8WXH5 440 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 OR2AG1Q9H205 316 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 DUS2Q9NX74 493 aaKnown RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 SAMD9LQ8IVG5 1584 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 PIGBOS1A0A0B4J2F0 54 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 B4DGG1 531 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ECI2O75521 394 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 NKX2-5P52952 324 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF705AQ6ZN79 300 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 C6P13671 934 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 FRKP42685 505 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 NOMO3P69849 1222 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 RAB35Q15286 201 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TTLQ8NG68 377 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 OR10T2Q8NGX3 314 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 GCDHQ92947 438 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 BHLHE40O14503 412 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ATG12O94817 140 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 AGR2O95994 175 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 RNF144AP50876 292 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 UGCGQ16739 394 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 SLC2A7Q6PXP3 512 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 UBXN10Q96LJ8 280 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ARHGAP9Q9BRR9 750 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TSSK6Q9BXA6 273 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 CD8B2A6NJW9 211 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 LCMT2O60294 686 aaKnown RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 CD8BP10966 210 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 GRPRP30550 384 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF181Q2M3W8 571 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TMPPEQ6ZT21 453 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 OR6N2Q8NGY6 317 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 VPS25Q9BRG1 176 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ERVK13-1Q9NX77 482 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 RPH3ALQ9UNE2 315 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TRBC2A0A5B9 178 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 E9PI62 339 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TMPRSS12Q86WS5 348 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 MOAP1Q96BY2 351 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF641Q96N77 438 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-201ENST00000306085 TWNKQ96RR1 684 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 EFCAB11Q9BUY7 163 aa12.97□□□□□ -0.33
TRIM56-201ENST00000306085 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CXCL17Q6UXB2 119 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 VITQ6UXI7 678 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 SPPL2BQ8TCT7 592 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 MITD1Q8WV92 249 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 SH3YL1Q96HL8 342 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 OSBPL2Q9H1P3 480 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 SNX10Q9Y5X0 201 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 DNMT3AQ9Y6K1 912 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CCDC88AQ3V6T2 1871 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 SYNGR4O95473 234 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 TGFB1P01137 390 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 TNFSF9P41273 254 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 AMZ2Q86W34 360 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 JPH3Q8WXH2 748 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 KCNIP1Q9NZI2 227 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 PCDHGA7Q9Y5G6 932 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 COQ9O75208 318 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 KLRK1P26718 216 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CCL23P55773 120 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 GALK2Q01415 458 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 TLE6Q9H808 572 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 HPSEQ9Y251 543 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 ADRB2P07550 413 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 MAOAP21397 527 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 XKR5Q6UX68 686 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 OTOP1Q7RTM1 612 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 HOXB13Q92826 284 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 TUBA1CQ9BQE3 449 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 POTEKPQ9BYX7 375 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 ZMAT5Q9UDW3 170 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms