RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ASB12Q8WXK4 309 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 FGF14Q92915 247 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 WRAP53Q9BUR4 548 aaKnown RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 ABCG8Q9H221 673 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 FBXL12Q9NXK8 326 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 IL36AQ9UHA7 158 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 NEU3Q9UQ49 428 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 MTCH2Q9Y6C9 303 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 CACNG3O60359 315 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 DFNA5O60443 496 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 EEDO75530 441 aaKnown RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 ASGR2P07307 311 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 GSTM1P09488 218 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 SLC35A2P78381 396 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 TARDBPQ13148 414 aaKnown RBP eCLIP10.49□□□□□ -0.73
LSM3-201ENST00000306024 BTN1A1Q13410 526 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 TSTA3Q13630 321 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 TAF1AQ15573 450 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 KIAA0930Q6ICG6 404 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 RASSF6Q6ZTQ3 369 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 SLC34A3Q8N130 599 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 ZFAND1Q8TCF1 268 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 ASB15Q8WXK1 588 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 RIT1Q92963 219 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 HLA-CQ95604 372 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 KIFC1Q9BW19 673 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 UBE2ZQ9H832 354 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 LATS2Q9NRM7 1088 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 PIAS3Q9Y6X2 628 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 EDDM13A0A1B0GTR0 161 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 BTN3A1O00481 513 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 VPS26AO75436 327 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 PCMT1P22061 227 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 ERVK-8P63133 956 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 ZMYND11Q15326 602 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 PTPRNQ16849 979 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 COQ5Q5HYK3 327 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 KIAA1614Q5VZ46 1190 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 Q7L0L9 218 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 CYP4Z1Q86W10 505 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 PTRH1Q86Y79 214 aaKnown RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 STAG3L4Q8TBR4 150 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 SPPL2AQ8TCT8 520 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 TSPEARQ8WU66 669 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 CDKN2AIPNLQ96HQ2 116 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 ASPNQ9BXN1 380 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 MED28Q9H204 178 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 SAV1Q9H4B6 383 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 LHX3Q9UBR4 397 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 WASH3PC4AMC7 463 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CLDN7O95471 211 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 STSP08842 583 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 ZNF7P17097 686 aaPredicted RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 CTRB1P17538 263 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 EVI2BP34910 448 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 RPS5P46782 204 aaKnown RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 RORCP51449 518 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 RPA4Q13156 261 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 FBXO43Q4G163 708 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CLVS2Q5SYC1 327 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CTRB2Q6GPI1 263 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 GPRIN3Q6ZVF9 776 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 KCTD20Q7Z5Y7 419 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 ADAMTSL2Q86TH1 951 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 FAM124AQ86V42 546 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 DEFB123Q8N688 67 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CXorf40AQ8TE69 158 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 KCNC2Q96PR1 638 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 SMIM14Q96QK8 99 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 EGFL8Q99944 293 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CDADC1Q9BWV3 514 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 ACOXLQ9NUZ1 547 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 OBP2AQ9NY56 170 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CD84Q9UIB8 345 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PCDHGB2Q9Y5G2 931 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 A0A0U1RQS6 177 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PIPSLA2A3N6 862 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 SMIM30A4D0T7 59 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 SLC7A4O43246 635 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 SOCS5O75159 536 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 VIPP01282 170 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 GGT1P19440 569 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PSMA1P25786 263 aaKnown RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 DSTNP60981 165 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PWP1Q13610 501 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 KCTD11Q693B1 232 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 SLC44A2Q8IWA5 706 aaPredicted RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 PYCR2Q96C36 320 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 RSPRY1Q96DX4 576 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 RPP25Q9BUL9 199 aaKnown RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 SLC35C2Q9NQQ7 365 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 IGSF5Q9NSI5 407 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 SSR3Q9UNL2 185 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 MN1Q10571 1320 aaPredicted RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 TSC2P49815 1807 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PRAMEF33A0A0G2JMD5 474 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 UBFD1O14562 309 aaKnown RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 PRAMEF10O60809 474 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CREG1O75629 220 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PRAMEF1O95521 474 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms