RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RHBGQ9H310 441 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 ZNF490Q9ULM2 529 aaPredicted RBP24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 ASB1Q9Y576 335 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 TRAV17A0A0B4J275 112 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 KLHL2O95198 593 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 ALDOAP04075 364 aaKnown RBP24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 EPORP19235 508 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 CASP2P42575 452 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 TNFSF10P50591 281 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 ZNF33BQ06732 778 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 NR6A1Q15406 480 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 ADPRMQ3LIE5 342 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 UBAP2Q5T6F2 1119 aaKnown RBP24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 FHL5Q5TD97 284 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 ARMC2Q8NEN0 867 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 OR2L5Q8NG80 312 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 OR1N1Q8NGS0 311 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 KCNK13Q9HB14 408 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 MMP25Q9NPA2 562 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 PRDM9Q9NQV7 894 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 PLA2G3Q9NZ20 509 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 STMN3Q9NZ72 180 aa24.85■■□□□ 1.57
CDKN2A-201ENST00000304494 PRRC2CQ9Y520 2896 aaKnown RBP24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 MYBL2P10244 700 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 CD22P20273 847 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 SERPINB9P50453 376 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 SRSF1Q07955 248 aaKnown RBP eCLIP24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 PCDH1Q08174 1060 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 TGM3Q08188 693 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 E2F2Q14209 437 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 H3F3CQ6NXT2 135 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 VN1R5Q7Z5H4 357 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 ADAMTS18Q8TE60 1221 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 ZNF354BQ96LW1 612 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 NTNG1Q9Y2I2 539 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 SHANK1Q9Y566 2161 aa24.84■■□□□ 1.57
CDKN2A-201ENST00000304494 A8MUI8 341 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 B3GALT2O43825 422 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 WDPCPO95876 746 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 MTHFD2P13995 350 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 GFAPP14136 432 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 EPB42P16452 691 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 SERPINB1P30740 379 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 PLA2G16P53816 162 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 MRPL49Q13405 166 aaKnown RBP24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 SUN3Q8TAQ9 357 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 MAGEB10Q96LZ2 347 aaPredicted RBP24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 PAFAH2Q99487 392 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 VPS11Q9H270 941 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 COPS7BQ9H9Q2 264 aaPredicted RBP24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 ABI3Q9P2A4 366 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 MMACHCQ9Y4U1 282 aa24.83■■□□□ 1.57
CDKN2A-201ENST00000304494 FLNBO75369 2602 aaKnown RBP24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 A0A0G2JN53 185 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 KRT38O76015 456 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 CBX6O95503 412 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 CNTFP26441 200 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 ALDH18A1P54886 795 aaKnown RBP24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 SLC26A5P58743 744 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 BTG2P78543 158 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 ELOAQ14241 798 aaKnown RBP24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 NAA30Q147X3 362 aaPredicted RBP24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 SETDB1Q15047 1291 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 INAQ16352 499 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 MED27Q6P2C8 311 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 IFT20Q8IY31 132 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 SRFBP1Q8NEF9 429 aaKnown RBP24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 QRFPRQ96P65 431 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 SERINC2Q96SA4 455 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 PRM3Q9NNZ6 103 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 ANGPTL3Q9Y5C1 460 aa24.82■■□□□ 1.56
CDKN2A-201ENST00000304494 COL12A1Q99715 3063 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 A0A087WUV0 522 aaPredicted RBP24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 IGKV3D-11A0A0A0MRZ8 115 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 TCRBV16S1A1N1A0A5B0 115 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 OR5H15A6NDH6 313 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 FAM227AF5H4B4 570 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 AGFG2O95081 481 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 TBX6O95947 436 aaPredicted RBP24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 MAOAP21397 527 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 MSH2P43246 934 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 MTTPP55157 894 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 TAS2R50P59544 299 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 RUNX2Q13950 521 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 MEP1AQ16819 746 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 PFKFB4Q16877 469 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 ACER2Q5QJU3 275 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 ADNP2Q6IQ32 1131 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 ABHD17CQ6PCB6 329 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 FAM180AQ6UWF9 173 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 LAS2Q8IYD9 372 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 CYP4X1Q8N118 509 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 SLC5A8Q8N695 610 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 TEX9Q8N6V9 391 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 AMER2Q8N7J2 671 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 GRHL3Q8TE85 626 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 ISL2Q96A47 359 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 KCNC2Q96PR1 638 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 ROGDIQ9GZN7 287 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms