RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TMEM233B4DJY2 109 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 RRP8O43159 456 aaKnown RBP23.19■■□□□ 1.3
HOXC9-201ENST00000303450 KLK10O43240 276 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 AP5B1Q2VPB7 878 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 FAM198BQ6UWH4 519 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 UBE3DQ7Z6J8 389 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 AMER3Q8N944 861 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 LRRC8CQ8TDW0 803 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 SORT1Q99523 831 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 GPN2Q9H9Y4 310 aaPredicted RBP23.19■■□□□ 1.3
HOXC9-201ENST00000303450 AHSPQ9NZD4 102 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 TRPC4Q9UBN4 977 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 MAP4K5Q9Y4K4 846 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 DNAJC15Q9Y5T4 150 aa23.19■■□□□ 1.3
HOXC9-201ENST00000303450 URB1O60287 2271 aaKnown RBP23.19■■□□□ 1.3
HOXC9-201ENST00000303450 C21orf140B9A014 251 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 RTCAO00442 366 aaKnown RBP23.18■■□□□ 1.3
HOXC9-201ENST00000303450 PLPP1O14494 284 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 KLF11O14901 512 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 SEMA3DO95025 777 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 EIF2S3P41091 472 aaKnown RBP23.18■■□□□ 1.3
HOXC9-201ENST00000303450 SSR2P43308 183 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 RPS15P62841 145 aaKnown RBP23.18■■□□□ 1.3
HOXC9-201ENST00000303450 MAT1AQ00266 395 aaKnown RBP23.18■■□□□ 1.3
HOXC9-201ENST00000303450 DNASE1L3Q13609 305 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 OR4C11Q6IEV9 310 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 COX15Q7KZN9 410 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 OVCH1Q7RTY7 1134 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 KIRREL3Q8IZU9 778 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 ZNF781Q8N8C0 355 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 FKBP10Q96AY3 582 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 DCBLD2Q96PD2 775 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 ACPTQ9BZG2 426 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 PRDM7Q9NQW5 492 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 HCN3Q9P1Z3 774 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 VPS29Q9UBQ0 182 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 RAXQ9Y2V3 346 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 SERTM1A2A2V5 107 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 B3GALT2O43825 422 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 SNNO75324 88 aaPredicted RBP23.18■■□□□ 1.3
HOXC9-201ENST00000303450 ALBP02768 609 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 CD63P08962 238 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 ARFIP1P53367 373 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 MTTPP55157 894 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 OCA2Q04671 838 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 NCF4Q15080 339 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 IMPG1Q17R60 797 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 VASH2Q86V25 355 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 PROSER1Q86XN7 944 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 OR5T3Q8NGG3 340 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 TWIST2Q8WVJ9 160 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 QRFPRQ96P65 431 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 SERINC2Q96SA4 455 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 EFHD1Q9BUP0 239 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 GPR87Q9BY21 358 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 CLK4Q9HAZ1 481 aaKnown RBP23.18■■□□□ 1.3
HOXC9-201ENST00000303450 ZNF282Q9UDV7 671 aaPredicted RBP23.18■■□□□ 1.3
HOXC9-201ENST00000303450 KCND3Q9UK17 655 aa23.18■■□□□ 1.3
HOXC9-201ENST00000303450 RAB40ALP0C0E4 278 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 TSFMP43897 325 aaKnown RBP23.17■■□□□ 1.3
HOXC9-201ENST00000303450 RPL14P50914 215 aaKnown RBP23.17■■□□□ 1.3
HOXC9-201ENST00000303450 OLR1P78380 273 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 HMGCS1Q01581 520 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 SYT16Q17RD7 645 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 UGT3A2Q3SY77 523 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 TRIM46Q7Z4K8 759 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 DDIASQ8IXT1 998 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 ENDOVQ8N8Q3 282 aaKnown RBP23.17■■□□□ 1.3
HOXC9-201ENST00000303450 OR51Q1Q8NH59 317 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 SORBS1Q9BX66 1292 aaKnown RBP23.17■■□□□ 1.3
HOXC9-201ENST00000303450 MRPL1Q9BYD6 325 aaKnown RBP23.17■■□□□ 1.3
HOXC9-201ENST00000303450 MKKSQ9NPJ1 570 aaPredicted RBP23.17■■□□□ 1.3
HOXC9-201ENST00000303450 CTSFQ9UBX1 484 aa23.17■■□□□ 1.3
HOXC9-201ENST00000303450 FARSAQ9Y285 508 aaKnown RBP23.17■■□□□ 1.3
HOXC9-201ENST00000303450 LIFP15018 202 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 HIST1H1TP22492 207 aaPredicted RBP23.16■■□□□ 1.3
HOXC9-201ENST00000303450 ATP5A1P25705 553 aaKnown RBP23.16■■□□□ 1.3
HOXC9-201ENST00000303450 CERS1P27544 350 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 MRPL14Q6P1L8 145 aaKnown RBP23.16■■□□□ 1.3
HOXC9-201ENST00000303450 ZNF793Q6ZN11 406 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 LRRC69Q6ZNQ3 347 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 ACOT4Q8N9L9 421 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 CKAP2Q8WWK9 683 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 NPLQ9BXD5 320 aaPredicted RBP23.16■■□□□ 1.3
HOXC9-201ENST00000303450 FAM117AQ9C073 453 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 SLC26A1Q9H2B4 701 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 HAO1Q9UJM8 370 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 PADI2Q9Y2J8 665 aa23.16■■□□□ 1.3
HOXC9-201ENST00000303450 SLC28A1O00337 649 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 TERTO14746 1132 aaKnown RBP23.15■■□□□ 1.3
HOXC9-201ENST00000303450 CHST10O43529 356 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 F8A1P23610 371 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 PTPN4P29074 926 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 BSGP35613 385 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 OCRLQ01968 901 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 SPDYAQ5MJ70 313 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 RNF165Q6ZSG1 346 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 NUDT13Q86X67 352 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 MAGEB18Q96M61 343 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 TUBB1Q9H4B7 451 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms