RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZNF763Q0D2J5 394 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 PPIGQ13427 754 aaKnown RBP eCLIP12.36□□□□□ -0.43
HIF3A-204ENST00000300862 MAPK11Q15759 364 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 RNF130Q86XS8 419 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 P3H2Q8IVL5 708 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 CCDC103Q8IW40 242 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-204ENST00000300862 CPA6Q8N4T0 437 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 OR9Q2Q8NGE9 314 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 EPYCQ99645 322 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 REEP4Q9H6H4 257 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 ZDHHC4Q9NPG8 344 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 CCDC88CQ9P219 2028 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 PIPSLA2A3N6 862 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 RNASET2O00584 256 aaKnown RBP12.36□□□□□ -0.43
HIF3A-204ENST00000300862 SLC22A1O15245 554 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 KLHL18O94889 574 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 SOD1P00441 154 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 SOAT1P35610 550 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 PRIM2P49643 509 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 VEGFBP49765 207 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 ZNF33BQ06732 778 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 SCARB2Q14108 478 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 ZNF77Q15935 545 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 SLC5A12Q1EHB4 618 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 CCDC80Q76M96 950 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 OR10G2Q8NGC3 310 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 OR6Q1Q8NGQ2 317 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-204ENST00000300862 LGALS12Q96DT0 336 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 HRASLS5Q96KN8 279 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 PITX2Q99697 317 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 COPS4Q9BT78 406 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 RAD18Q9NS91 495 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 RHCGQ9UBD6 479 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 ZNF282Q9UDV7 671 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-204ENST00000300862 PCYT1BQ9Y5K3 369 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-204ENST00000300862 HELZP42694 1942 aaKnown RBP12.36□□□□□ -0.43
HIF3A-204ENST00000300862 PLXNA2O75051 1894 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 CXorf51AA0A1B0GTR3 108 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 ANTXRLA6NF34 631 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 ZNF197O14709 1029 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 TNFRSF21O75509 655 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 LIPAP38571 399 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 SLC19A1P41440 591 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 NFE2L1Q14494 772 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 GANABQ14697 944 aaKnown RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 ARHGEF6Q15052 776 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 EXOC3L2Q2M3D2 409 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 RAET1GQ6H3X3 334 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 ERAP2Q6P179 960 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 LINC00299Q6ZSB3 139 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 PRSS48Q7RTY5 328 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 CAMKMTQ7Z624 323 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 GRASPQ7Z6J2 395 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 SLC22A16Q86VW1 577 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 SFTPA1Q8IWL2 248 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 NLGN4XQ8N0W4 816 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 DYNC2LI1Q8TCX1 351 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 UTP15Q8TED0 518 aaKnown RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 C16orf78Q8WTQ4 265 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 EFHD2Q96C19 240 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 PPCDCQ96CD2 204 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 VPS35Q96QK1 796 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 CTRCQ99895 268 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 DMRT3Q9NQL9 472 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 PADI2Q9Y2J8 665 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 DYRK1BQ9Y463 629 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 OR2A25A4D2G3 310 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 QSOX1O00391 747 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 SPINT1O43278 529 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 MMP20O60882 483 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 FURINP09958 794 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 C1GALT1C1LP0DN25 315 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 CHI3L1P36222 383 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 TGFBR2P37173 567 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 RPS26P62854 115 aaKnown RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 TAP2Q03519 686 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 DMC1Q14565 340 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 GCNT6Q5T4J0 391 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 C6orf183Q5T699 404 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 SPRED2Q7Z698 418 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 SVOPQ8N4V2 548 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 GTPBP3Q969Y2 492 aaKnown RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 ZBTB20Q9HC78 741 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-204ENST00000300862 NECTIN3Q9NQS3 549 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 GPR83Q9NYM4 423 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 SNX8Q9Y5X2 465 aa12.35□□□□□ -0.43
HIF3A-204ENST00000300862 PRAMEF33A0A0G2JMD5 474 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 TSPAN11A1L157 253 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PRAMEF10O60809 474 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PCSK2P16519 638 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PTPN2P17706 415 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PPIBP23284 216 aaKnown RBP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 CYP4F2P78329 520 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 SF3B4Q15427 424 aaKnown RBP eCLIP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 HIST2H2ACQ16777 129 aaPredicted RBP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 DGUOKQ16854 277 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms