RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 COQ8AQ8NI60 647 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF431Q8TF32 576 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C12orf43Q96C57 262 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 INSL5Q9Y5Q6 135 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 A0A1W2PQ45 241 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 A0A1W2PQY0 241 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FOXD2O60548 495 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 IFNA21P01568 189 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GNG2P59768 71 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM115Q12893 351 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GRB7Q14451 532 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PDSS2Q86YH6 399 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BOLLQ8N9W6 283 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NPLQ9BXD5 320 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 B3GAT2Q9NPZ5 323 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CDC14AQ9UNH5 594 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RNF6Q9Y252 685 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BEST1O76090 585 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GABRA3P34903 492 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HNF1BP35680 557 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PON3Q15166 354 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FLYWCH1Q4VC44 716 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM107Q6UX40 140 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CD300LFQ8TDQ1 290 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BORCS8Q96FH0 119 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 IL17FQ96PD4 163 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DPH2Q9BQC3 489 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RPF2Q9H7B2 306 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MTMR11A4FU01 709 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 COCHO43405 550 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DIO3P55073 304 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMCO2Q7Z6W1 182 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ERI1Q8IV48 349 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 THAP6Q8TBB0 222 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CRTAC1Q9NQ79 661 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NLE1Q9NVX2 485 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SH2B3Q9UQQ2 575 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GRID2O43424 1007 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CBSLP0DN79 551 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CBSP35520 551 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TPRG1Q6ZUI0 275 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC9B2Q86UD5 537 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SORCS1Q8WY21 1168 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SMPDL3AQ92484 453 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CYP17A1P05093 508 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GKN2Q86XP6 184 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DNAJB8Q8NHS0 232 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 EPYCQ99645 322 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GPR22Q99680 433 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NTPCRQ9BSD7 190 aaKnown RBP13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ENAMQ9NRM1 1142 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C14orf119Q9NWQ9 140 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SARDHQ9UL12 918 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CD8B2A6NJW9 211 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CAPN14A8MX76 684 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PROM1O43490 865 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CD8BP10966 210 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MECP2P51608 486 aaKnown RBP13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 STC1P52823 247 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC18A1P54219 525 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LIPKQ5VXJ0 399 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C2CD4AQ8NCU7 369 aaPredicted RBP13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 WDR20Q8TBZ3 569 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PLEKHO2Q8TD55 490 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GATAD2BQ8WXI9 593 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 POLDIP3Q9BY77 421 aaKnown RBP13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OR6C74A6NCV1 312 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PAK4O96013 591 aaPredicted RBP13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GSTM3P21266 225 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NDUFS1P28331 727 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LRIT3Q3SXY7 679 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM164Q5U3C3 297 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NCEH1Q6PIU2 408 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 Q6ZVL8 140 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GNPDA2Q8TDQ7 276 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MR1Q95460 341 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC6A7Q99884 636 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 A0A1B0GVI7 797 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 M0R2N6 131 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KCNJ13O60928 360 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 STOMP27105 288 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 IRF5Q13568 498 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SGCAQ16586 387 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BTBD16Q32M84 506 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MAPK15Q8TD08 544 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 COQ4Q9Y3A0 265 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 A0A1W2PP55 124 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MATN2O00339 956 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms