RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SEC16AO15027 2179 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF99A8MXY4 864 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ANKRD66B4E2M5 251 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GNB5O14775 395 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 DNAJB6O75190 326 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 MEF2AQ02078 507 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 NFATC2Q13469 925 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PTPRRQ15256 657 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 MPP7Q5T2T1 576 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 REP15Q6BDI9 236 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 HMBOX1Q6NT76 420 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 FRMD7Q6ZUT3 714 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ARMCX6Q7L4S7 300 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GALNT5Q7Z7M9 940 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZSWIM9Q86XI8 627 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 SPPL2CQ8IUH8 684 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 LAS2Q8IYD9 372 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GPR137CQ8N3F9 429 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RCBTB1Q8NDN9 531 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PSD4Q8NDX1 1056 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 FRS2Q8WU20 508 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 NSMAFQ92636 917 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 TUBA1CQ9BQE3 449 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 XKR8Q9H6D3 395 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 CXorf21Q9HAI6 301 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 CLEC4EQ9ULY5 219 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 COL1A1P02452 1464 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 EFCAB9A8MZ26 197 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF487B1APH4 448 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 E7ENX8 843 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 hCG_2039718K7EN88 272 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ACOX3O15254 700 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 HCRTR2O43614 444 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 KLF8O95600 359 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 EDNRAP25101 427 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 CD40LGP29965 261 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 SLC5A9Q2M3M2 681 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 CLEC6AQ6EIG7 209 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 C1orf52Q8N6N3 182 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ANKK1Q8NFD2 765 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 OR5T2Q8NGG2 359 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 OR8H1Q8NGG4 311 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 FAM174AQ8TBP5 190 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ADAD1Q96M93 576 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PTCHD1Q96NR3 888 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RDH12Q96NR8 316 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 NTPCRQ9BSD7 190 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ACTR6Q9GZN1 396 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 WDR55Q9H6Y2 383 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 BRD7Q9NPI1 651 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PNPOQ9NVS9 261 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 APOBEC3BQ9UH17 382 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 MCTS1Q9ULC4 181 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RIPK3Q9Y572 518 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PIAS3Q9Y6X2 628 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 SOX1O00570 391 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ENPP3O14638 875 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 FLRT2O43155 660 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 TM4SF1P30408 202 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GGT2P36268 569 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 FOLR3P41439 243 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RRADP55042 308 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 TAS2R39P59534 338 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 DBPQ10586 325 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GRK1Q15835 563 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 TIGD6Q17RP2 521 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 FAM76BQ5HYJ3 339 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 AADACL4Q5VUY2 407 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 NOXRED1Q6NXP6 359 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF782Q6ZMW2 699 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RNF111Q6ZNA4 994 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 MOB2Q70IA6 237 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 UTS2BQ765I0 119 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ALYREFQ86V81 257 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF584Q8IVC4 421 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 OR6C4Q8NGE1 309 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 SCGB1C1Q8TD33 95 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 UCN3Q969E3 161 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GLYATL1Q969I3 302 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PKP4Q99569 1192 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 IRF2BPLQ9H1B7 796 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 KCNS2Q9ULS6 477 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PCDHB10Q9UN67 800 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 EXOSC1Q9Y3B2 195 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PCDHGA6Q9Y5G7 932 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 SLIT2O94813 1529 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 LDB2O43679 373 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ECI2O75521 394 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 FGF18O76093 207 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PIGRP01833 764 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GKN3PP0CG01 181 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF43P17038 809 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 UGT1A4P22310 534 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ASPAP45381 313 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 OR4D2P58180 307 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ADAM15Q13444 863 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF169Q14929 603 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 SCGB2B2Q4G0G5 96 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms