RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TAS2R50P59544 299 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 RAB39AQ14964 217 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 EIF3MQ7L2H7 374 aaKnown RBP15.65■□□□□ 0.1
CTCF-201ENST00000264010 OXR1Q8N573 874 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 RAB2BQ8WUD1 216 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 SMARCD2Q92925 531 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 RAB7BQ96AH8 199 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 BBS4Q96RK4 519 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 PAQR5Q9NXK6 330 aaPredicted RBP15.65■□□□□ 0.1
CTCF-201ENST00000264010 SLC25A37Q9NYZ2 338 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 BOLA1Q9Y3E2 137 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 TESMINQ9Y4I5 508 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 SOX6P35712 828 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 ALDH3B2P48448 385 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 LRIF1Q5T3J3 769 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 ZNF605Q86T29 641 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 TRIM48Q8IWZ4 208 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 NEIL2Q969S2 332 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 DPH2Q9BQC3 489 aaPredicted RBP15.65■□□□□ 0.1
CTCF-201ENST00000264010 TUBA1CQ9BQE3 449 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 CERS4Q9HA82 394 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 SLC52A3Q9NQ40 469 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 RAB25P57735 213 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 MEF2AQ02078 507 aaPredicted RBP15.64■□□□□ 0.09
CTCF-201ENST00000264010 DDI2Q5TDH0 399 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 CPZQ66K79 652 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 NXPE4Q6UWF7 544 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 OR8H3Q8N146 312 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 STX19Q8N4C7 294 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ASCC1Q8N9N2 400 aaKnown RBP15.64■□□□□ 0.09
CTCF-201ENST00000264010 SETD7Q8WTS6 366 aaKnown RBP15.64■□□□□ 0.09
CTCF-201ENST00000264010 PHF10Q8WUB8 498 aaKnown RBP15.64■□□□□ 0.09
CTCF-201ENST00000264010 S100ZQ8WXG8 99 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 NCSTNQ92542 709 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 CXorf40BQ96DE9 158 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 FAIM2Q9BWQ8 316 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 RASSF1Q9NS23 344 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 IMP3Q9NV31 184 aaKnown RBP15.64■□□□□ 0.09
CTCF-201ENST00000264010 HEPACAM2A8MVW5 462 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 FAM47E-STBD1D6RA91 191 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 LOC110117498-PIK3R3F6TDL0 507 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ACPPP15309 386 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 IMPA1P29218 277 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 CASP9P55211 416 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 PUDPQ08623 228 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 SCARB2Q14108 478 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 HEPACAMQ14CZ8 416 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 TMIEQ8NEW7 156 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ZSWIM3Q96MP5 696 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ZNF347Q96SE7 839 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 BTNL2Q9UIR0 455 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 A0A1B0GTW7 788 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 C12orf71A8MTZ7 269 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ACOX3O15254 700 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 C6orf47O95873 294 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 C9P02748 559 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 LAPTM4AQ15012 233 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ZSWIM7Q19AV6 140 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 RIMKLAQ8IXN7 391 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 HS3ST5Q8IZT8 346 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 UXS1Q8NBZ7 420 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 C19orf18Q8NEA5 215 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 PIK3C3Q8NEB9 887 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ZNF480Q8WV37 535 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 ERVK-11Q9UQG0 969 aa15.64■□□□□ 0.09
CTCF-201ENST00000264010 PLK4O00444 970 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 RGS10O43665 173 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 C1orf105O95561 183 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 CAPNS1P04632 268 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 CDKN2CP42773 168 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 TGM3Q08188 693 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 SF1Q15637 639 aaKnown RBP15.63■□□□□ 0.09
CTCF-201ENST00000264010 TCEAL5Q5H9L2 206 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 ZNF57Q68EA5 555 aaPredicted RBP15.63■□□□□ 0.09
CTCF-201ENST00000264010 RRM2BQ7LG56 351 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 SMPDL3AQ92484 453 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
CTCF-201ENST00000264010 THUMPD1Q9NXG2 353 aaKnown RBP15.63■□□□□ 0.09
CTCF-201ENST00000264010 GULP1Q9UBP9 304 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 CCL27Q9Y4X3 112 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 CROCCQ5TZA2 2017 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 EFCAB10A6NFE3 127 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 TMEM202A6NGA9 273 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 CCR8P51685 355 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.63■□□□□ 0.09
CTCF-201ENST00000264010 SHQ1Q6PI26 577 aaKnown RBP15.63■□□□□ 0.09
CTCF-201ENST00000264010 TBPL2Q6SJ96 375 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 LILRA3Q8N6C8 439 aaPredicted RBP15.63■□□□□ 0.09
CTCF-201ENST00000264010 FAM86B1Q8N7N1 296 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 PHOSPHO2Q8TCD6 241 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 MSANTD3Q96H12 275 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 NPLQ9BXD5 320 aaPredicted RBP15.63■□□□□ 0.09
CTCF-201ENST00000264010 IKZF5Q9H5V7 419 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 EXD2Q9NVH0 621 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 TAC3Q9UHF0 121 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 PPT2Q9UMR5 302 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 GPSM3Q9Y4H4 160 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 HCFC2Q9Y5Z7 792 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 SESN1Q9Y6P5 492 aa15.63■□□□□ 0.09
CTCF-201ENST00000264010 MEN1O00255 615 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms