RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SLC35B4Q969S0 331 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 TCEAL4Q96EI5 215 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 CEP19Q96LK0 163 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 SLC46A2Q9BY10 475 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 NUAK2Q9H093 628 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 GABARAPL1Q9H0R8 117 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 EHD1Q9H4M9 534 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 ZNF556Q9HAH1 456 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 CCNB1IP1Q9NPC3 277 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 FAM120CQ9NX05 1096 aaKnown RBP8.75□□□□□ -1.01
MSH4-201ENST00000263187 ZNF232Q9UNY5 417 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 AP3M1Q9Y2T2 418 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 TMED5Q9Y3A6 229 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 SCN5AQ14524 2016 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 RPLP0P05388 317 aaKnown RBP8.75□□□□□ -1.01
MSH4-201ENST00000263187 CDK1P06493 297 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 CBSLP0DN79 551 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 ZNF8P17098 575 aaPredicted RBP8.75□□□□□ -1.01
MSH4-201ENST00000263187 CBSP35520 551 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 RECQLP46063 649 aaPredicted RBP8.75□□□□□ -1.01
MSH4-201ENST00000263187 RGS6P49758 472 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 RAB15P59190 212 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 CNTN1Q12860 1018 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 NEK10Q6ZWH5 1172 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 COMMD6Q7Z4G1 85 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 TRMT11Q7Z4G4 463 aaKnown RBP8.75□□□□□ -1.01
MSH4-201ENST00000263187 OR8J2Q8NGG1 315 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 MYDGFQ969H8 173 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 WFDC6Q9BQY6 131 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 BEX2Q9BXY8 128 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 SNTG1Q9NSN8 517 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 IFT52Q9Y366 437 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 SNX11Q9Y5W9 270 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 TRBC2A0A5B9 178 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 C1orf226A1L170 272 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ANKDD1BA6NHY2 528 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ZW10O43264 779 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SERPIND1P05546 499 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 FHP07954 510 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 CXCR4P61073 352 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 MPEG1Q2M385 716 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SMU1Q2TAY7 513 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 FAM214AQ32MH5 1076 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 MPPE1Q53F39 396 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 C10orf62Q5T681 223 aaPredicted RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 RSBN1Q5VWQ0 802 aaPredicted RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 ERICH5Q6P6B1 374 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 GDPD4Q6W3E5 623 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ZNF783Q6ZMS7 281 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 DEF8Q6ZN54 512 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 GDPD3Q7L5L3 318 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 GPR65Q8IYL9 337 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SLC34A3Q8N130 599 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 AMER2Q8N7J2 671 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 OVCA2Q8WZ82 227 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 UCN3Q969E3 161 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 NEDD4LQ96PU5 975 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 DDX28Q9NUL7 540 aaKnown RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 ANKMY1Q9P2S6 941 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 TRBV4-1A0A0J9YWV2 114 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ANTXRLA6NF34 631 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 LOC110117498-PIK3R3F6TDL0 507 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 KPNA3O00505 521 aaPredicted RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 GADD45GO95257 159 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SOD2P04179 222 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ALPPL2P10696 532 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 TNNI3P19429 210 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 CCR2P41597 374 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 TBPL1P62380 186 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 CDK6Q00534 326 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 IFI44LQ53G44 452 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 GCNT6Q5T4J0 391 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ZNF697Q5TEC3 545 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SLC46A3Q7Z3Q1 461 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ELMOD1Q8N336 334 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 CBARPQ8N350 705 aaPredicted RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 OR2A12Q8NGT7 310 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 FIBINQ8TAL6 211 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 IPCEF1Q8WWN9 437 aaPredicted RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 PPCDCQ96CD2 204 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 OR2AG1Q9H205 316 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ELAC1Q9H777 363 aaKnown RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 TIGARQ9NQ88 270 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SPATA6Q9NWH7 488 aaPredicted RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 PCDHGA2Q9Y5H1 932 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 AGAP14A8MT82 685 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SCAMP1O15126 338 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ASNA1O43681 348 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ENTPD6O75354 484 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 MFN2O95140 757 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 POP4O95707 220 aaKnown RBP8.74□□□□□ -1.01
MSH4-201ENST00000263187 IL3P08700 152 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 ALOX5P09917 674 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 SSTR4P31391 388 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 GRK3P35626 688 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 HSPB3Q12988 150 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 MICAQ29983 383 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 GGTA1PQ4G0N0 100 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 UBE2UQ5VVX9 321 aa8.74□□□□□ -1.01
MSH4-201ENST00000263187 NXNL2Q5VZ03 156 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms