RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CCDC85BQ15834 202 aaPredicted RBP15.26■□□□□ 0.03
LMNB1-201ENST00000261366 IFI44LQ53G44 452 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 IER5LQ5T953 404 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 FLCNQ8NFG4 579 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 SUN5Q8TC36 379 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 SNAPC3Q92966 411 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 ASIC4Q96FT7 647 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 CRELD1Q96HD1 420 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 POLR2J2Q9GZM3 115 aaKnown RBP15.26■□□□□ 0.03
LMNB1-201ENST00000261366 CLN6Q9NWW5 311 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 DKK3Q9UBP4 350 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 PRAMEF33A0A0G2JMD5 474 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 A0A0G2JMP0 313 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 A0A0X1KG70 313 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 A0A1B0GVM2 712 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 MGAT4DA6NG13 374 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 HMX3A6NHT5 357 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 ICMTO60725 284 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 PRAMEF10O60809 474 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 YES1P07947 543 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 TSPAN19P0C672 248 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 HOXB6P17509 224 aaKnown RBP15.26■□□□□ 0.03
LMNB1-201ENST00000261366 ATF6P18850 670 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 CHMP24386 653 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 CCND3P30281 292 aaPredicted RBP15.26■□□□□ 0.03
LMNB1-201ENST00000261366 SOAT1P35610 550 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 RORCP51449 518 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 MC1RQ01726 317 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 HYAL2Q12891 473 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 MTAPQ13126 283 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 ATP13A5Q4VNC0 1218 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 PLAG1Q6DJT9 500 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 C22orf42Q6IC83 251 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 NXPE1Q8N323 547 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 DENND6BQ8NEG7 585 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 RAD9AQ99638 391 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 A0A1W2PQL4 384 aaPredicted RBP15.26■□□□□ 0.03
LMNB1-201ENST00000261366 FABP12A6NFH5 140 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 GADD45GO95257 159 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 VNN2O95498 520 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 ELNP15502 786 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 CSKP41240 450 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 SCN1BQ07699 218 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 MGAT3Q09327 533 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 VEZF1Q14119 521 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 NPAS3Q8IXF0 933 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 ELMOD2Q8IZ81 293 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 UBTD2Q8WUN7 234 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 CIDECQ96AQ7 238 aaPredicted RBP15.26■□□□□ 0.03
LMNB1-201ENST00000261366 SRRQ9GZT4 340 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 DNAJC11Q9NVH1 559 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 GPATCH2Q9NW75 528 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 NPAP1Q9NZP6 1156 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 PADI2Q9Y2J8 665 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 GRIP1Q9Y3R0 1128 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 PCDHGB2Q9Y5G2 931 aa15.26■□□□□ 0.03
LMNB1-201ENST00000261366 C2orf78A6NCI8 922 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 SLC38A8A6NNN8 435 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 CSO75390 466 aaKnown RBP15.25■□□□□ 0.03
LMNB1-201ENST00000261366 STC2O76061 302 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 PSMA1P25786 263 aaKnown RBP15.25■□□□□ 0.03
LMNB1-201ENST00000261366 LIMK1P53667 647 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 CAP1Q01518 475 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 BCL2L1Q07817 233 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 SCARB2Q14108 478 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 RTN4RL1Q86UN2 441 aaPredicted RBP15.25■□□□□ 0.03
LMNB1-201ENST00000261366 YIPF7Q8N8F6 280 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 ENKURQ8TC29 256 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 KCTD5Q9NXV2 234 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 ABT1Q9ULW3 272 aaKnown RBP15.25■□□□□ 0.03
LMNB1-201ENST00000261366 SNX7Q9UNH6 387 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 C12orf71A8MTZ7 269 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 SEPT4O43236 478 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 TPST2O60704 377 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 UGT2B17O75795 530 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 CRYZL1O95825 349 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 C6orf47O95873 294 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 PSKH1P11801 424 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 CBLP22681 906 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 RPS3P23396 243 aaKnown RBP eCLIP15.25■□□□□ 0.031e-6■■■□□ 16.7
LMNB1-201ENST00000261366 ETV6P41212 452 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 HBA1P69905 142 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 CHRNEQ04844 493 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 ABRQ12979 859 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 ZNF385BQ569K4 471 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 IQCF1Q8N6M8 205 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 SYT14Q8NB59 555 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 RNF170Q96K19 258 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 FAM120CQ9NX05 1096 aaKnown RBP15.25■□□□□ 0.03
LMNB1-201ENST00000261366 TEKT2Q9UIF3 430 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 CMAHPQ9Y471 501 aa15.25■□□□□ 0.03
LMNB1-201ENST00000261366 NPIPB15A6NHN6 443 aaPredicted RBP15.24■□□□□ 0.03
LMNB1-201ENST00000261366 ADAM12O43184 909 aa15.24■□□□□ 0.03
LMNB1-201ENST00000261366 FZD6O60353 706 aa15.24■□□□□ 0.03
LMNB1-201ENST00000261366 PSMA3P25788 255 aa15.24■□□□□ 0.03
LMNB1-201ENST00000261366 RPS26P62854 115 aaKnown RBP15.24■□□□□ 0.03
LMNB1-201ENST00000261366 PSPHP78330 225 aa15.24■□□□□ 0.03
LMNB1-201ENST00000261366 SPHARQ15513 63 aa15.24■□□□□ 0.03
LMNB1-201ENST00000261366 RTP2Q5QGT7 225 aa15.24■□□□□ 0.03
LMNB1-201ENST00000261366 KRT73Q86Y46 540 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms