RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 LHCGRP22888 699 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 ADAM15Q13444 863 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 INAVAQ3KP66 663 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 Q6ZVL8 140 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 GNPDA2Q8TDQ7 276 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 KIAA1191Q96A73 305 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 MAPKAP1Q9BPZ7 522 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SERTAD3Q9UJW9 196 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 CFL2Q9Y281 166 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SCO2O43819 266 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 BEST1O76090 585 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SPARCP09486 303 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PHC1P78364 1004 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 RHDQ02161 417 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 LMAN2Q12907 356 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 ZMYND11Q15326 602 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF565Q8N9K5 539 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 DCAF4L2Q8NA75 395 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 C9orf43Q8TAL5 461 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SCAMP4Q969E2 229 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 FBXL8Q96CD0 374 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SHDQ96IW2 340 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF471Q9BX82 626 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-201ENST00000261037 HRASLS2Q9NWW9 162 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 A0A1W2PP55 124 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 TSPAN6O43657 245 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 CYP17A1P05093 508 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF12P17014 697 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ADH7P40394 386 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 FLYWCH1Q4VC44 716 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SFT2D3Q587I9 215 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 TTLL10Q6ZVT0 673 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 GPRIN1Q7Z2K8 1008 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 TXNDC5Q8NBS9 432 aaKnown RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 OR6N2Q8NGY6 317 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 PNPLA2Q96AD5 504 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 FAM120CQ9NX05 1096 aaKnown RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 OR6C74A6NCV1 312 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SRCP12931 536 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ANKDD1AQ495B1 522 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 TCEANCQ8N8B7 351 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF350Q9GZX5 532 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 MRM3Q9HC36 420 aaKnown RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 CD320Q9NPF0 282 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 FZD3Q9NPG1 666 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 C14orf105Q9NVL8 296 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 C14orf166Q9Y224 244 aaKnown RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 Q9Y3F1 56 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 A0A1B0GVI7 797 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 C2orf78A6NCI8 922 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SNAI1O95863 264 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 GRPRP30550 384 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SLC18A2Q05940 514 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 C1orf61Q13536 156 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 UGT8Q16880 541 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 NKAPLQ5M9Q1 402 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 PDSS1Q5T2R2 415 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 NATD1Q8N6N6 113 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 OR2L2Q8NH16 312 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 KLHDC7BQ96G42 594 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 CMKLR1Q99788 373 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 FUZQ9BT04 418 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 NPLQ9BXD5 320 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 POLDIP3Q9BY77 421 aaKnown RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 DPAGT1Q9H3H5 408 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 A0A1W2PP18 115 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 A8MV72 311 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 AHSA1O95433 338 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ATF6P18850 670 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 GABRA3P34903 492 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 PIGFQ07326 219 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 UPP1Q16831 310 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF542PQ5EBM4 170 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 LSM14AQ8ND56 463 aaKnown RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SLCO2A1Q92959 643 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 NPY6RQ99463 290 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SEZ6LQ9BYH1 1024 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ACTL8Q9H568 366 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 BRF2Q9HAW0 419 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 GSKIPQ9P0R6 139 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 NOP16Q9Y3C1 178 aaKnown RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 A0A1W2PPK0 400 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 FZD9O00144 591 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 IFNA21P01568 189 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SLC6A6P31641 620 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 HOXD13P35453 343 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ACADVLP49748 655 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 POU6F2P78424 691 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-201ENST00000261037 IRF5Q13568 498 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ZBED5Q49AG3 693 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 SUN5Q8TC36 379 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 IGSF8Q969P0 613 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 MEAF6Q9HAF1 191 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 TREM1Q9NP99 234 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 PRTFDC1Q9NRG1 225 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 ATXN7L1Q9ULK2 861 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms