RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 HIST1H2AGP0C0S8 130 aaPredicted RBP18.17■□□□□ 0.5
SNX4-201ENST00000251775 ITGA2P17301 1181 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 HIST1H2ADP20671 130 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 HNF4AP41235 474 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 KIR3DL1P43629 444 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 DOC2BQ14184 412 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 DUOXA1Q1HG43 343 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 ZMAT1Q5H9K5 638 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 TSEN54Q7Z6J9 526 aaKnown RBP18.17■□□□□ 0.5
SNX4-201ENST00000251775 ZNF605Q86T29 641 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 CPA6Q8N4T0 437 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 CRELD1Q96HD1 420 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 HIST1H2AHQ96KK5 128 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 PANX1Q96RD7 426 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 HIST1H2AJQ99878 128 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 H2AFJQ9BTM1 129 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 SMURF1Q9HCE7 757 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 SLC25A13Q9UJS0 675 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 PCDHGA2Q9Y5H1 932 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 V9GYH0 126 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 PRRC2BQ5JSZ5 2229 aaKnown RBP18.17■□□□□ 0.5
SNX4-201ENST00000251775 ABHD14A-ACY1A0A1B0GW23 586 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 PLK4O00444 970 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 ATP1B2P14415 290 aaPredicted RBP18.17■□□□□ 0.5
SNX4-201ENST00000251775 ITPKAP23677 461 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 TSTQ16762 297 aaKnown RBP18.17■□□□□ 0.5
SNX4-201ENST00000251775 LILRA6Q6PI73 481 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 ZNF367Q7RTV3 350 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 ZNF438Q7Z4V0 828 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 RNF175Q8N4F7 328 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 L3MBTL4Q8NA19 623 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 RASSF5Q8WWW0 418 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 SCAMP4Q969E2 229 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 RLIMQ9NVW2 624 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 HCFC1R1Q9NWW0 138 aa18.17■□□□□ 0.5
SNX4-201ENST00000251775 CRNNQ9UBG3 495 aaPredicted RBP18.17■□□□□ 0.5
SNX4-201ENST00000251775 A0A1W2PQ67 120 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 M0R129 80 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 EPN2O95208 641 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 MPC1LP0DKB6 136 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 CYP2A7P20853 494 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 MTAPQ13126 283 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 EIF4HQ15056 248 aaKnown RBP18.16■□□□□ 0.5
SNX4-201ENST00000251775 BAK1Q16611 211 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 YIF1BQ5BJH7 314 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 ARMC4Q5T2S8 1044 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 ZNF621Q6ZSS3 439 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 MSANTD1Q6ZTZ1 278 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 SLC5A8Q8N695 610 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 ZFYVE19Q96K21 471 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 ROGDIQ9GZN7 287 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 ATG10Q9H0Y0 220 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 RUBCNLQ9H714 662 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 C3orf14Q9HBI5 128 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 ASAH2Q9NR71 780 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 CFAP20Q9Y6A4 193 aaKnown RBP18.16■□□□□ 0.5
SNX4-201ENST00000251775 CXorf51AA0A1B0GTR3 108 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 TMEM229AB2RXF0 380 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.16■□□□□ 0.5
SNX4-201ENST00000251775 NEDD8-MDP1E9PL57 170 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 GFYI3L273 518 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 CCRL2O00421 344 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 GPX5O75715 221 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 FGF18O76093 207 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 CCL5P13501 91 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 ASB15Q8WXK1 588 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 MGLLQ99685 303 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 CCM2Q9BSQ5 444 aa18.16■□□□□ 0.5
SNX4-201ENST00000251775 MAGEB17A8MXT2 336 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 CCL16O15467 120 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 TRAPPC2P0DI81 140 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 TRAPPC2BP0DI82 140 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 CTSAP10619 480 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 CD72P21854 359 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 PRPH2P23942 346 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 HNMTP50135 292 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 WNT3P56703 355 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 WDR5P61964 334 aaKnown RBP18.15■□□□□ 0.5
SNX4-201ENST00000251775 MED22Q15528 200 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 SSX1Q16384 188 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 GDPD4Q6W3E5 623 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 NOXA1Q86UR1 476 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 SYNPOQ8N3V7 929 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 DENND6BQ8NEG7 585 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 B3GNT7Q8NFL0 401 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 GPR151Q8TDV0 419 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 CMTM7Q96FZ5 175 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 APOLD1Q96LR9 279 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 DYRK4Q9NR20 520 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 MS4A12Q9NXJ0 267 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 SLC6A14Q9UN76 642 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 SGTAO43765 313 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 SCN2BO60939 215 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 NUDT7P0C024 238 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 TEKQ02763 1124 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 PPIGQ13427 754 aaKnown RBP eCLIP18.15■□□□□ 0.55e-6■■□□□ 14.2
SNX4-201ENST00000251775 VEZF1Q14119 521 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 ZNF79Q15937 498 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 TIMM50Q3ZCQ8 353 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms