RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 ALPK1Q96QP1 1244 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 APOBEC3BQ9UH17 382 aaKnown RBP7.09□□□□□ -1.27
SSR1-201ENST00000244763 BAZ2AQ9UIF9 1905 aaKnown RBP7.09□□□□□ -1.27
SSR1-201ENST00000244763 CITO14578 2027 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 PRAMEF33A0A0G2JMD5 474 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 A0A0G2JN53 185 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 LOC100130705A0A1B0GUX0 176 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 FAM170BA6NMN3 283 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 TBX1O43435 398 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 PRAMEF10O60809 474 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 HSD17B7P56937 341 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 TMEM214Q6NUQ4 689 aaKnown RBP7.09□□□□□ -1.27
SSR1-201ENST00000244763 CDK15Q96Q40 435 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 B4GALT6Q9UBX8 382 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 VSTM2BA6NLU5 285 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 BPNT1O95861 308 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 P04436 131 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 LPLP06858 475 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 JUPP14923 745 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 S1PR1P21453 382 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 OR4D2P58180 307 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 ABRAXAS2Q15018 415 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 SPIN3Q5JUX0 258 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 MANEALQ5VSG8 457 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 COQ10BQ9H8M1 238 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 SCP2D1Q9UJQ7 156 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 KANTRA0A1W2PQU2 76 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 LDB2O43679 373 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 OR7A10O76100 309 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 THBS2P35442 1172 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 ECH1Q13011 328 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 DSG2Q14126 1118 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 GPR153Q6NV75 609 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 C3orf33Q6P1S2 294 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 ZSWIM9Q86XI8 627 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 RBM12BQ8IXT5 1001 aaKnown RBP7.09□□□□□ -1.27
SSR1-201ENST00000244763 ZNF358Q9NW07 568 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 GHRLQ9UBU3 117 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 HCN2Q9UL51 889 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 PCDHB14Q9Y5E9 798 aa7.09□□□□□ -1.27
SSR1-201ENST00000244763 PSMD9O00233 223 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 CREG1O75629 220 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 PDYNP01213 254 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 ZNF12P17014 697 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 GALK2Q01415 458 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 HMGCS1Q01581 520 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 EVX2Q03828 476 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 RAB33AQ14088 237 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 LIN52Q52LA3 116 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 ZUFSPQ96AP4 578 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 AURKBQ96GD4 344 aaPredicted RBP7.09□□□□□ -1.28
SSR1-201ENST00000244763 SLC22A4Q9H015 551 aa7.09□□□□□ -1.28
SSR1-201ENST00000244763 BLOC1S5-TXNDC5H3BN57 136 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ACOX3O15254 700 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ATG12O94817 140 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 TIMP1P01033 207 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 IGHEP01854 428 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 IL3P08700 152 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 PET100P0DJ07 73 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 HSD11B2P80365 405 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 RPA4Q13156 261 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 MLC1Q15049 377 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 CST6Q15828 149 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ZNF613Q6PF04 617 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 JAGN1Q8N5M9 183 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 NFKBIDQ8NI38 313 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ESAMQ96AP7 390 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ZFP3Q96NJ6 502 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 CCDC115Q96NT0 180 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 FAM129BQ96TA1 746 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 HCN4Q9Y3Q4 1203 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 CFAP20Q9Y6A4 193 aaKnown RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 PHYHO14832 338 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 EMC8O43402 210 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 CSTAP01040 98 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 PABPC4LP0CB38 370 aaKnown RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 GSTT2P0CG29 244 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 CSTF1Q05048 431 aaKnown RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 MXD1Q05195 221 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 MZT1Q08AG7 82 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 GRIK2Q13002 908 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 GANABQ14697 944 aaKnown RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 LRP10Q7Z4F1 713 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ABHD12BQ7Z5M8 362 aaPredicted RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 ZNF689Q96CS4 500 aaPredicted RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 SMOQ99835 787 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 KATNBL1Q9H079 304 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ALG5Q9Y673 324 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 C10orf71Q711Q0 1435 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 M0QX08 132 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 KHNYNO15037 678 aaKnown RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 CD72P21854 359 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 SLC25A11Q02978 314 aaKnown RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 RCAN2Q14206 197 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 ZNF267Q14586 743 aaPredicted RBP7.08□□□□□ -1.28
SSR1-201ENST00000244763 RUNDC3AQ59EK9 446 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 GLT8D1Q68CQ7 371 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 AQP11Q8NBQ7 271 aa7.08□□□□□ -1.28
SSR1-201ENST00000244763 LRRN4CLQ8ND94 238 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms