RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 C11orf24Q96F05 449 aaPredicted RBP14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ACTL8Q9H568 366 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 FOLH1BQ9HBA9 442 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 PRKAG2Q9UGJ0 569 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 TLR6Q9Y2C9 796 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 ARL5AQ9Y689 179 aa14.11□□□□□ -0.15
PTPRA-201ENST00000216877 MRPS14O60783 128 aaKnown RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 CCNDBP1O95273 360 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 CBR1P16152 277 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 COL19A1Q14993 1142 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 LGALSLQ3ZCW2 172 aaPredicted RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 PTP4A1Q93096 173 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 KCTD7Q96MP8 289 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 SPATA33Q96N06 139 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 KLK14Q9P0G3 267 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 AFF4Q9UHB7 1163 aaKnown RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 TRBV23-1A0A0A0MS06 115 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 PROM1O43490 865 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 TRIM3O75382 744 aaPredicted RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 SLC43A1O75387 559 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 RHCEP18577 417 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 LCN1P31025 176 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 KIAA0907Q7Z7F0 614 aaPredicted RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 FAM83AQ86UY5 434 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 TMEM151BQ8IW70 566 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 LILRB2Q8N423 598 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 OR52P1PQ8NH57 321 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 MOSPD2Q8NHP6 518 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 ELMOD3Q96FG2 381 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 CCDC115Q96NT0 180 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 ATOH8Q96SQ7 321 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 TMEM175Q9BSA9 504 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 DUSP16Q9BY84 665 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 MAGIXQ9H6Y5 334 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 IPPKQ9H8X2 491 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 HHATLQ9HCP6 504 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 NFKBIL1Q9UBC1 381 aaPredicted RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 ERVK-19Q9WJR5 959 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 SHROOM3Q8TF72 1996 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 SLC22A23A1A5C7 686 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 YJEFN3A6XGL0 299 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 SUV39H1O43463 412 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 ALDOBP05062 364 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 KDELR2P33947 212 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 HSPA7P48741 367 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 CSRP3P50461 194 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 CLDN20P56880 219 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 GRIN2CQ14957 1233 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 DEF8Q6ZN54 512 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 CLRN3Q8NCR9 226 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 C9orf43Q8TAL5 461 aaPredicted RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 CREB3L4Q8TEY5 395 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 AP3S1Q92572 193 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 LINGO1Q96FE5 620 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 GPR137Q96N19 417 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 OPALINQ96PE5 141 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 NIPSNAP1Q9BPW8 284 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 NUSAP1Q9BXS6 441 aaKnown RBP14.1□□□□□ -0.15
PTPRA-201ENST00000216877 TMEM168Q9H0V1 697 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 OR6C2Q9NZP2 312 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 STUB1Q9UNE7 303 aa14.1□□□□□ -0.15
PTPRA-201ENST00000216877 TEX13CA0A0J9YWL9 993 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 DSC2Q02487 901 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 OR4F3Q6IEY1 312 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 WASH2PQ6VEQ5 465 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 LIX1LQ8IVB5 337 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 MAL2Q969L2 176 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 SFXN2Q96NB2 322 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 PKMYT1Q99640 499 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 GPR63Q9BZJ6 419 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 OR51J1Q9H342 316 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 TREX1Q9NSU2 369 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 EXO1Q9UQ84 846 aaKnown RBP14.09□□□□□ -0.15
PTPRA-201ENST00000216877 PCDHGB3Q9Y5G1 929 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 RPS10-NUDT3A0A1W2PQS6 291 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 L7N2F9 121 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 ARNTLO00327 626 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 EEF1E1O43324 174 aaKnown RBP14.09□□□□□ -0.15
PTPRA-201ENST00000216877 KERAO60938 352 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 ACADLP28330 430 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 FLI1Q01543 452 aaPredicted RBP14.09□□□□□ -0.15
PTPRA-201ENST00000216877 AKIRIN2Q53H80 203 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 KIAA0319Q5VV43 1072 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 SLC16A13Q7RTY0 426 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 GPR155Q7Z3F1 870 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 LURAP1LQ8IV03 231 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 MSRB3Q8IXL7 192 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 SIDT2Q8NBJ9 832 aaKnown RBP14.09□□□□□ -0.15
PTPRA-201ENST00000216877 TEPSINQ96N21 525 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 NLNQ9BYT8 704 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 CD93Q9NPY3 652 aa14.09□□□□□ -0.15
PTPRA-201ENST00000216877 PRMT7Q9NVM4 692 aaPredicted RBP14.09□□□□□ -0.15
PTPRA-201ENST00000216877 FAM74A7A6NL05 159 aa14.08□□□□□ -0.15
PTPRA-201ENST00000216877 J3KR12 359 aa14.08□□□□□ -0.15
PTPRA-201ENST00000216877 BEST1O76090 585 aa14.08□□□□□ -0.15
PTPRA-201ENST00000216877 VTNP04004 478 aa14.08□□□□□ -0.15
PTPRA-201ENST00000216877 ZP3P21754 424 aa14.08□□□□□ -0.15
PTPRA-201ENST00000216877 MAPK1P28482 360 aa14.08□□□□□ -0.15
PTPRA-201ENST00000216877 CNR2P34972 360 aa14.08□□□□□ -0.15
PTPRA-201ENST00000216877 CDKN2CP42773 168 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms