RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ing4Q8C0D7 249 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CenpxQ8C4X1 78 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pih1d2Q8CHR9 315 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mtrf1Q8K126 446 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem5Q8VDX6 444 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rem2Q8VEL9 341 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rsph1Q8VIG3 301 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Atp5c1Q91VR2 298 aaKnown RBP9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Lrch4Q921G6 680 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NaaaQ9D7V9 362 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Erp27Q9D8U3 272 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr71Q9QZ18 312 aa9.4□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Trbv4A0A075B5I2 113 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Trbv20A0A0B4J1H5 111 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pgap3A2A559 320 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Glb1l3A2RSQ1 649 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm3526E9PZM0 191 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gpr31F8VQN3 319 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm7694J3QNH8 270 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm5152L7N200 190 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mup13L7N222 235 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Scarb2O35114 478 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 P01668 110 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Kcne1P23299 129 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 YwhahP68510 246 aaKnown RBP9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ext2P70428 718 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tcfl5Q32NY8 489 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 1700066B19RikQ3TS39 127 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Dennd1bQ3U1T9 766 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Atf7ip2Q3UL97 452 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Arhgef15Q5FWH6 849 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 2900092C05RikQ5I0V9 184 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Taar7aQ5QD12 358 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm11487Q5RIS0 354 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vezf1Q5SXC4 518 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Arnt2Q61324 712 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tbccd1Q640P7 552 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Lix1Q6P566 282 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Q810M1 233 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gen1Q8BMI4 908 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 4921511C20RikQ8BVT7 469 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cd276Q8VE98 316 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr622Q8VGY7 317 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr676Q8VGZ9 317 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pcdhga3Q91XY5 928 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Chmp1aQ921W0 196 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prdm9Q96EQ9 843 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mageb2A2AHM0 380 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prrg1A2BFE8 218 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Aldoart1A6ZI46 419 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 IqckD3YYL3 290 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm9493F6SVV1 192 aaKnown RBP9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tex54G3UW99 86 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 OpcmlG5E8G3 345 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cx3cl1O35188 395 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Kpna3O35344 521 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DgkaO88673 730 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 P01670 111 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 P01671 111 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 P01672 111 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 MbP04247 154 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 PfklP12382 780 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HexbP20060 536 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Casp2P29594 452 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Inpp5jP59644 1003 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rps7P62082 194 aaKnown RBP9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ucp2P70406 309 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Eif4ebp2P70445 120 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pdcd1Q02242 288 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 GmpsQ3THK7 693 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Q3USZ8 430 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Kcna5Q61762 602 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prm3Q62100 101 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DgkzQ80UP3 929 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rxfp3Q8BGE9 472 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mamdc2Q8CG85 686 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DnerQ8JZM4 737 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CenpoQ8K015 298 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TmieQ8K467 153 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ubqln1Q8R317 582 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Med28Q920D3 178 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 GhdcQ99J23 532 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NansQ99J77 359 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fabp12Q9DAK4 132 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Dhx34Q9DBV3 1145 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TollipQ9QZ06 274 aa9.39□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Faap100A2ACJ2 879 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fam83cA2ARK0 776 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr74A2BHP6 318 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cyb5rlB1AS42 316 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zfp282E9PVC2 666 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cyp2c23E9Q5K4 494 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm7073E9QAS1 335 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm3476K7N6V0 257 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gtpbp1O08582 668 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prl7a1O54830 266 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TcapO70548 167 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 GzmcP08882 248 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 GypaP14220 168 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 PnmtP40935 295 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms