RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ccdc85aQ5SP85 500 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tmem199Q5SYH2 208 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pon2Q62086 354 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Znf280cQ6P3Y5 742 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Syt16Q7TN83 639 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Chpt1Q8C025 398 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Il17rdQ8JZL1 738 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cdt1Q8R4E9 557 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Kctd5Q8VC57 234 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mrps5Q99N87 432 aaKnown RBP12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slc25a46Q9CQS4 418 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ubqln2Q9QZM0 638 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Smarcb1Q9Z0H3 385 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cst9Q9Z0H6 137 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Myo10F8VQB6 2062 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 PpigA2AR02 752 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fbxw9F8VPX2 458 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rgs7O54829 469 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Foxq1O70220 400 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Bmp7P23359 430 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Lrpap1P55302 360 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Barhl1P63157 327 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rars2Q3U186 578 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Q3UY34 256 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rassf5Q5EBH1 413 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Bcap31Q61335 245 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Znf513Q6PD29 541 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr1307Q7TQX1 312 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ubp1Q811S7 540 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 CptpQ8BS40 216 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slitrk6Q8C110 840 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dpep2Q8C255 478 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mettl3Q8C3P7 580 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 H2afjQ8R1M2 129 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ndufs1Q91VD9 727 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rbm47Q91WT8 590 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tmem179bQ9CY24 219 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mdm1Q9D067 708 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Q9DAY5 185 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ramp2Q9WUP0 189 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tceal7A3KGA4 98 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Zfp40B1B1D3 796 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Xpnpep3B7ZMP1 506 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tsga10ipF7A1F0 157 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm16506F7ANP4 213 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Wsb2O54929 404 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ccnb2P30276 398 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Sox3P53784 375 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Irf7P70434 457 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cxcr4P70658 359 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Krt76Q3UV17 594 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Elmod1Q3V1U8 326 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slc10a7Q5PT53 340 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Sf1Q64213 653 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Abcg1Q64343 666 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Skiv2lQ6NZR5 1244 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr320Q7TRZ4 306 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dsg1bQ7TSF1 1060 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slitrk5Q810B7 957 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Prr5Q812A5 387 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Peli2Q8BST6 419 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 PigzQ8BTP0 560 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tusc3Q8BTV1 347 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fam129bQ8R1F1 749 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Klhl25Q8R2P1 589 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slco3a1Q8R3L5 710 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Impa2Q91UZ5 290 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 TrabdQ99JY4 376 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Q9D937 123 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vps29Q9QZ88 182 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 FarsbQ9WUA2 589 aaKnown RBP12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Hey1Q9WV93 299 aa12.93□□□□□ -0.34
Nup88-201ENSMUST00000035283 Prr14lE9Q7C4 1971 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fam46dB1ATX6 390 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 BC049352E9Q2Z6 85 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Psmc3ipO35047 217 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Scrg1O88745 98 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mup4P11590 178 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Serpine1P22777 402 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Sox6P40645 827 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Kcnj5P48545 419 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Hyal4Q05A56 481 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Satb1Q60611 764 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 MarcoQ60754 518 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dennd5aQ6PAL8 1287 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Q810M1 233 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Aoc2Q812C9 757 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 MylipQ8BM54 445 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dppa4Q8CCG4 296 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dmtf1Q8CE22 761 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vmn1r203Q8R273 311 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Med17Q8VCD5 649 aaKnown RBP12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rps19Q9CZX8 145 aaKnown RBP12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tex19.2Q9D5S1 317 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Uqcrc2Q9DB77 453 aaKnown RBP12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pidd1Q9ERV7 915 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Panx1Q9JIP4 426 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Phc2Q9QWH1 850 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dio2Q9Z1Y9 266 aa12.92□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gbf1Q6DFZ1 1861 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms