RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Cldn2O88552 230 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 EgfP01132 1217 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Bmp6P20722 510 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Serpina5P70458 405 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Mrgprb1Q3UG61 350 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Gm14851Q5ERJ0 116 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Alg8Q6P8H8 526 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Smad3Q8BUN5 425 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Fbxl22Q8C7B6 236 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tmem259Q8CIV2 574 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Ddx52Q8K301 598 aaKnown RBP10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 PiguQ8K358 434 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Prrg2Q8R182 198 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Vmn1r33Q8R2E0 305 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Olfr818Q8VG46 318 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Pqbp1Q91VJ5 263 aaKnown RBP10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tpra1Q99MU1 369 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Kdelr2Q9CQM2 212 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Dph2Q9CR25 489 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zswim2Q9D9X6 631 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tp73Q9JJP2 631 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Dnaja4Q9JMC3 397 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Xpr1Q9Z0U0 695 aa10.32□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Olfr1366A0A1W2P740 328 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zfp945E9PYM8 794 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Usp2O88623 613 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tspan5P62080 268 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Muc1Q02496 630 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Chsy3Q5DTK1 884 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 TefmQ5SSK3 364 aaKnown RBP10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Nr0b1Q61066 472 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Gdi2Q61598 445 aaKnown RBP10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 TCAIMQ66JZ4 499 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Npr2Q6VVW5 1047 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Chst9Q76EC5 413 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Rxfp4Q7TQP4 414 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zfp763Q8BIC7 588 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zfpm2Q8CCH7 1151 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Olfr1278Q8VF39 313 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Olfr441Q8VFS5 310 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Ankrd54Q91WK7 299 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Ferd3lQ923Z4 168 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Atp5dQ9D3D9 168 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Prss52Q9D9M0 321 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Prl8a6Q9DAY2 240 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Sorcs1Q9JLC4 1167 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Elf4Q9Z2U4 655 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 A0A1Y7VIU7 259 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tmem245B1AZA5 876 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zfp40B1B1D3 796 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 NoctO35710 429 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Clcn7O70496 803 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zfp14P10755 501 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Lamp1P11438 406 aaKnown RBP10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tcf3P15806 651 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Ap1g1P22892 822 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 CdonQ32MD9 1250 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Lingo2Q3URE9 606 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Sim1Q61045 765 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tgfbr2Q62312 592 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Smad2Q62432 467 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Trpv1Q704Y3 839 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Ctdsp2Q8BX07 270 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Cdc73Q8JZM7 531 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Polr1eQ8K202 482 aaKnown RBP10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Ubqln1Q8R317 582 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Nipal2Q91WC7 383 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Pcdhgb2Q91XX7 928 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Cnot11Q9CWN7 505 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Exo5Q9CXP9 373 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Upk1aQ9D132 257 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 4930503E14RikQ9D583 177 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 PirQ9D711 290 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Mfsd2aQ9DA75 534 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Stra6lQ9DBN1 621 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 RetnlaQ9EP95 111 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Wdr61Q9ERF3 305 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Fiz1Q9WTJ4 500 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Tcf7l1Q9Z1J1 584 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Xlr4aA2BI40 215 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Aadacl2B2RWD2 401 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Olfr549E9Q542 316 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Gm7945F6QI24 236 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Gtpbp1O08582 668 aaKnown RBP10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Cyp21P03940 487 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Chrnb1P09690 501 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Aldh1a1P24549 501 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Yes1Q04736 541 aaKnown RBP10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Xlr4cQ3TKR2 215 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Gdpgp1Q3TLS3 386 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zdhhc20Q5Y5T1 380 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 DazlQ64368 298 aaKnown RBP10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Rrm2bQ6PEE3 351 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 MroQ7TNB4 248 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Zdhhc15Q8BGJ0 337 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Fam109aQ8BH49 266 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Spon2Q8BMS2 330 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Gpr22Q8BZL4 432 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Saysd1Q8K190 188 aa10.31□□□□□ -0.76
Rnf40-201ENSMUST00000033088 Il31raQ8K5B1 716 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms