RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Tpd52Q62393 224 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ppp3r2Q63811 179 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vwa2Q70UZ7 791 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc39a4Q78IQ7 660 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Syt16Q7TN83 639 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Prr14Q7TPN9 612 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Kctd20Q8CDD8 419 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ces2aQ8QZR3 558 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ptges3Q9R0Q7 160 aaKnown RBP16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Tet2Q4JK59 1912 aaKnown RBP16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Prss56F2YMG0 604 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cyp4a31F8WGU9 509 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vmn1r58G3X9U3 310 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cbx2P30658 519 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 MedagQ14BA6 303 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Mep1bQ61847 704 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr1045Q7TR80 315 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Trim36Q80WG7 729 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Serpinb9dQ8BMT0 377 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr771Q8VFH6 317 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr606Q8VGZ8 319 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gpr37l1Q99JG2 481 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Twist2Q9D030 160 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Sphk2Q9JIA7 617 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Plxna2P70207 1894 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm10718D3Z1I7 227 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 C6E9Q6D8 931 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Chst3O88199 472 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Mbl1P39039 239 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 SnrpgP62309 76 aaKnown RBP16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc39a10Q6P5F6 833 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Fam126aQ6P9N1 521 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Lysmd4Q8CC84 293 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cnot3Q8K0V4 751 aaKnown RBP16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 PiguQ8K358 434 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Atp5f1Q9CQQ7 256 aaKnown RBP16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Med18Q9CZ82 208 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm13089A2AGW7 455 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm572B1ARY8 399 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vmn2r106E9PY92 862 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 PtprhE9Q0N2 971 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc27a6E9Q9W4 619 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 GypaP14220 168 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ubl4aP21126 157 aaKnown RBP16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 A1bgQ19LI2 512 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Bcar1Q61140 874 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Thnsl2Q80W22 483 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Duoxa2Q9D311 320 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 PolmQ9JIW4 496 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Tp73Q9JJP2 631 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Pramef20B1ARV6 477 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ifi213D3Z5G0 586 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cyp2c69E9PXC3 491 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gh1P06880 216 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Zp3P10761 424 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Csn1s1P19228 313 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Trpc5osQ3UHV4 110 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 KptnQ8VCX6 430 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Htatip2Q9Z2G9 242 aa16.22■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Igkv12-98A0A0G2JGF9 115 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Igkv12-46A0A140T8P6 115 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ankle1A8VU90 534 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Znf382B2RXC5 579 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Kpna4O35343 521 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 ThP24529 498 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Hoxd9P28357 339 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 SPINDOCQ05AH6 381 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Lhfpl5Q4KL25 219 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ripk1Q60855 656 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc6a4Q60857 630 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Bcap31Q61335 245 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 VclQ64727 1066 aaKnown RBP16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Glrx5Q80Y14 152 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gk5Q8BX05 534 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Trnt1Q8K1J6 434 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Unc5aQ8K1S4 898 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 FlcnQ8QZS3 579 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Emid1Q91VF5 444 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Pramel1Q99MW3 458 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Myl9Q9CQ19 172 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 3300002I08RikQ9CXH3 147 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Tmem269Q9D4Y8 254 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Dpp7Q9ET22 506 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Dnajb2Q9QYI5 324 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Sema4gQ9WUH7 837 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 TomtA1Y9I9 258 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Nfatc1O88942 717 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Hsd3b1P24815 373 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Pou1f1Q00286 291 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 PrlrQ08501 608 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Adora2bQ60614 332 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Coq8aQ60936 645 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc35f1Q8BGK5 408 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 IlvblQ8BU33 632 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 ZxdcQ8C8V1 858 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vps4aQ8VEJ9 437 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Q922M7 232 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Dusp26Q9D700 211 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Panx1Q9JIP4 426 aa16.21■□□□□ 0.19
Ctcf-201ENSMUST00000005841 ProdhQ9WU79 599 aa16.21■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms