RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Macrod2Q3UYG8 475 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 PtprcapQ64697 197 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 PdprQ7TSQ8 878 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Tusc3Q8BTV1 347 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Nedd4lQ8CFI0 1004 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Ak6Q8VCP8 172 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Hapln1Q9QUP5 356 aaKnown RBP15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Col12a1Q60847 3120 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Lcn11A2BHR2 178 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Gm11236J3QMS7 360 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Gm3159K7N760 267 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Acod1P54987 488 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 MybphP70402 483 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 ChatQ03059 641 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Proser3Q7TSA6 634 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Cstf2Q8BIQ5 580 aaKnown RBP15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Tnfaip8l1Q8K288 186 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 RbksQ8R1Q9 323 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Utp4Q8R2N2 686 aaKnown RBP15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Mterf3Q8R3J4 412 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Olfr382Q8VF79 312 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Q91V76 315 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Gorasp1Q91X51 446 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Lrrc49Q91YK0 686 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Slc8b1Q925Q3 585 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Mzt2Q9CQ25 159 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Exosc7Q9D0M0 291 aaKnown RBP15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Mau2Q9D2X5 619 aaKnown RBP15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Atp5dQ9D3D9 168 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 4930578G10RikQ9D4Q4 153 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Q9DAY5 185 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Fam13cQ9DBR2 601 aa15.62■□□□□ 0.09
Trim28-201ENSMUST00000005705 Auts2A0A087WPF7 1261 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Klhl3E0CZ16 587 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Vmn2r116E9Q6I0 856 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Adrb1P34971 466 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Bmpr1aP36895 532 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 CidecP56198 239 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Ntsr2P70310 416 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Irf7P70434 457 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 G6pdxQ00612 515 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 GiprQ0P543 460 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Tgtp2Q3T9E4 415 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 PomkQ3TUA9 349 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Q3UST5 385 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 HadhQ61425 314 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Tgtp1Q62293 415 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 BC061212Q6P8K3 481 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Slc7a6Q8BGK6 515 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Prkd3Q8K1Y2 889 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Ahi1Q8K3E5 1047 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Cbx7Q8VDS3 158 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Klhl28Q9CR40 571 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Rpl4Q9D8E6 419 aaKnown RBP15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Xylt2Q9EPL0 865 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 C1qtnf3Q9ES30 246 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Gm8897L7N294 181 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Vmn2r92L7N2A4 860 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Chrm4P32211 479 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Eif4ebp2P70445 120 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 BC080695Q66JY9 481 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Olfr1051Q7TR76 308 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Elmod2Q8BGF6 293 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Pp2d1Q8BVT6 620 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 PxkQ8BX57 582 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Fbxl22Q8C7B6 236 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 P3h2Q8CG71 703 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 AjubaQ91XC0 547 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Kdelr2Q9CQM2 212 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Txndc17Q9CQM5 123 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Rpn2Q9DBG6 631 aaKnown RBP15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Ralgps2Q9ERD6 590 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Tyk2Q9R117 1184 aa15.61■□□□□ 0.09
Trim28-201ENSMUST00000005705 Gm5478D3Z6R0 159 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Xkr6E9Q6C8 638 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Mtx2O88441 263 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 P01878 344 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Pyroxd2Q3U4I7 581 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Hepacam2Q4VAH7 463 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Il1rapQ61730 570 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Zmiz1Q6P1E1 1072 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Olfr503Q7TRU8 323 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Q80Y39 304 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Sumf2Q8BPG6 308 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Ubr7Q8BU04 425 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Sh3rf2Q8BZT2 735 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Zhx3Q8C0Q2 951 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Slc5a11Q8K0E3 673 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 KptnQ8VCX6 430 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Olfr586Q8VH13 317 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Scpep1Q920A5 452 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Bcl7aQ9CXE2 210 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Snx7Q9CY18 387 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Mdm1Q9D067 708 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Ankrd7Q9D504 279 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Trpv4Q9EPK8 871 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Acot2Q9QYR9 453 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Olfr316A0A0N4SVP2 306 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Spats1A2RRY8 269 aa15.6■□□□□ 0.09
Trim28-201ENSMUST00000005705 Gm16506F7ANP4 213 aa15.6■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms