RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 LYVE1Q9Y5Y7 322 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 PLXND1Q9Y4D7 1925 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 KIAA1549LQ6ZVL6 1849 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 POP7O75817 140 aaKnown RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 TBX6O95947 436 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 LCKP06239 509 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 PCSK2P16519 638 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 HOXB6P17509 224 aaKnown RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 ACADLP28330 430 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 IDUAP35475 653 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 BMPR1AP36894 532 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 GPR1P46091 355 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 MVKQ03426 396 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 EEF1A2Q05639 463 aaKnown RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 ZNF763Q0D2J5 394 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 C2orf80Q0P641 193 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 CAMK2GQ13555 558 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 DGCR6Q14129 220 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 FAM71E1Q6IPT2 247 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 NXPE4Q6UWF7 544 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 ZNF557Q8N988 423 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 C11orf65Q8NCR3 313 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 ZNF540Q8NDQ6 660 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 SETD9Q8NE22 299 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 MIPOL1Q8TD10 442 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 SLC5A11Q8WWX8 675 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 POP5Q969H6 163 aaKnown RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 YIPF6Q96EC8 236 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 WDR34Q96EX3 536 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 METTL2AQ96IZ6 378 aaKnown RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 LRIG1Q96JA1 1093 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 FAM129BQ96TA1 746 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 PITX2Q99697 317 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 ACAT2Q9BWD1 397 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 BHLHE41Q9C0J9 482 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-225ENST00000640209 SELENONQ9NZV5 590 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 SLC6A14Q9UN76 642 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 MAP4K5Q9Y4K4 846 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 INSL6Q9Y581 213 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 PCDHGA6Q9Y5G7 932 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 GMEB1Q9Y692 573 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 PMF1-BGLAPU3KQ54 211 aa8.97□□□□□ -0.97
NECAP1-225ENST00000640209 M0R129 80 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 FAM20BO75063 409 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 FGF19O95750 216 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 VBP1P61758 197 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 SELENOWP63302 87 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 FPGSQ05932 587 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 PDE7AQ13946 482 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 CLCA4Q14CN2 919 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 SLC5A12Q1EHB4 618 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 FNDC3BQ53EP0 1204 aaKnown RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 TSPYL5Q86VY4 417 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 RNF130Q86XS8 419 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 ETFBKMTQ8IXQ9 262 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 SLC5A8Q8N695 610 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 SMYD1Q8NB12 490 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 FBXO15Q8NCQ5 510 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 VPS37AQ8NEZ2 397 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 OR4C15Q8NGM1 316 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 OR5AR1Q8NGP9 310 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 GOT1L1Q8NHS2 421 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 HCAR2Q8TDS4 363 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 STARD8Q92502 1023 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 RORBQ92753 470 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 RPL3LQ92901 407 aaKnown RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 FEVQ99581 238 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 EPYCQ99645 322 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 RSPO3Q9BXY4 272 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 RSPH9Q9H1X1 276 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 AMBNQ9NP70 447 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 C1GALT1Q9NS00 363 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 TM7SF3Q9NS93 570 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 TBC1D23Q9NUY8 699 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 FAIMQ9NVQ4 179 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 ZNF282Q9UDV7 671 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 SLC23A2Q9UGH3 650 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 RNF6Q9Y252 685 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 MRPS23Q9Y3D9 190 aaKnown RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 DYRK1BQ9Y463 629 aa8.96□□□□□ -0.97
NECAP1-225ENST00000640209 CFAP20Q9Y6A4 193 aaKnown RBP8.96□□□□□ -0.97
NECAP1-225ENST00000640209 PSMD11O00231 422 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 FOXE1O00358 373 aaPredicted RBP8.96□□□□□ -0.98
NECAP1-225ENST00000640209 RTCAO00442 366 aaKnown RBP8.96□□□□□ -0.98
NECAP1-225ENST00000640209 GABARAPO95166 117 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 IL3P08700 152 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 PSMB9P28065 219 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 PNLIPRP1P54315 467 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 ST8SIA6P61647 398 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 SCARB2Q14108 478 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 IGFN1Q86VF2 1251 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 SNX29P2Q8IUI4 249 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 CCDC103Q8IW40 242 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.96□□□□□ -0.98
NECAP1-225ENST00000640209 PPCDCQ96CD2 204 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 OTUB2Q96DC9 234 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 SIGLEC11Q96RL6 698 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 APOL4Q9BPW4 351 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 NIPSNAP1Q9BPW8 284 aa8.96□□□□□ -0.98
NECAP1-225ENST00000640209 BTBD2Q9BX70 525 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms